RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 TNIP3Q96KP6 325 aa1.48□□□□□ -2.17
SNORD28B-201ENST00000390993 EPYCQ99645 322 aa1.48□□□□□ -2.17
SNORD28B-201ENST00000390993 NECTIN3Q9NQS3 549 aa1.48□□□□□ -2.17
SNORD28B-201ENST00000390993 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.48□□□□□ -2.17
SNORD28B-201ENST00000390993 RGL1Q9NZL6 768 aa1.48□□□□□ -2.17
SNORD28B-201ENST00000390993 SLC25A13Q9UJS0 675 aa1.48□□□□□ -2.17
SNORD28B-201ENST00000390993 B3GNT3Q9Y2A9 372 aa1.48□□□□□ -2.17
SNORD28B-201ENST00000390993 PCDHGB1Q9Y5G3 927 aa1.48□□□□□ -2.17
SNORD28B-201ENST00000390993 SRPRBQ9Y5M8 271 aaKnown RBP1.48□□□□□ -2.17
SNORD28B-201ENST00000390993 INSL5Q9Y5Q6 135 aa1.48□□□□□ -2.17
SNORD28B-201ENST00000390993 SHROOM4Q9ULL8 1493 aa1.48□□□□□ -2.17
SNORD28B-201ENST00000390993 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 A0A1W2PPC4 97 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 FAM234BA2RU67 622 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 OR2W5A6NFC9 320 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 A6NNC1 897 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 EFCAB8A8MWE9 144 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 BTBD18B2RXH4 712 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 MCIDASD6RGH6 385 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 F8W8V4 182 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 GTPBP1O00178 669 aaKnown RBP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 NKX2-8O15522 239 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 CBFA2T3O75081 653 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 ATG13O75143 517 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 CAMTA2O94983 1202 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 HLA-DQA2P01906 255 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 WNT1P04628 370 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 ITGA5P08648 1049 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 ALDOCP09972 364 aaKnown RBP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 RFPL3SP0C7P2 107 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 DAOP14920 347 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 PECAM1P16284 738 aaPredicted RBP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 TSHRP16473 764 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 EEF1GP26641 437 aaKnown RBP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 GABRB3P28472 473 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 TNFRSF8P28908 595 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 AKT1P31749 480 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 ARRB2P32121 409 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 PEX5P50542 639 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 CASP5P51878 434 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 POLE2P56282 527 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 DSCR9P59020 149 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 SEC61A1P61619 476 aaKnown RBP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 BTKQ06187 659 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 CRYZQ08257 329 aaKnown RBP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 SLC39A14Q15043 492 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 PLCB4Q15147 1175 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 SHBQ15464 509 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 TBRG1Q3YBR2 411 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 ZNF628Q5EBL2 1059 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 FNBP1LQ5T0N5 605 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 OTUD3Q5T2D3 398 aaPredicted RBP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 ATPAF1Q5TC12 328 aaPredicted RBP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 GFI1BQ5VTD9 330 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 KLHDC7AQ5VTJ3 777 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 DCAF12L2Q5VW00 463 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 RAP1GAP2Q684P5 730 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 NUGGCQ68CJ6 796 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 NCAPH2Q6IBW4 605 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 RINT1Q6NUQ1 792 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 SPSB3Q6PJ21 355 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 KIAA0408Q6ZU52 694 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 PIK3AP1Q6ZUJ8 805 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 NEK10Q6ZWH5 1172 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 TRILQ7L0X0 811 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 C14orf80Q86SX3 495 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 TRABD2AQ86V40 505 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 SLC25A41Q8N5S1 370 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 WIPF2Q8TF74 440 aaPredicted RBP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 SLC22A17Q8WUG5 538 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 BRI3BPQ8WY22 251 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 RTP4Q96DX8 246 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 HES6Q96HZ4 224 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 ADAD1Q96M93 576 aaKnown RBP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 PAAF1Q9BRP4 392 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 IFT27Q9BW83 186 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 CCDC134Q9H6E4 229 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 ACTR5Q9H9F9 607 aaPredicted RBP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 PLAC1Q9HBJ0 212 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 MLXIPLQ9NP71 852 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 KCNK9Q9NPC2 374 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 PNRC2Q9NPJ4 139 aaKnown RBP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 DDX21Q9NR30 783 aaKnown RBP eCLIP1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 GJB4Q9NTQ9 266 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 IL36RNQ9UBH0 155 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 BAG5Q9UL15 447 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 FAM50BQ9Y247 325 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 RAP2CQ9Y3L5 183 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 LMTK3Q96Q04 1460 aa1.47□□□□□ -2.17
SNORD28B-201ENST00000390993 A0A0G2JK05 382 aa1.46□□□□□ -2.18
SNORD28B-201ENST00000390993 PLSCR5A0PG75 271 aa1.46□□□□□ -2.18
SNORD28B-201ENST00000390993 GXYLT2A0PJZ3 443 aa1.46□□□□□ -2.18
SNORD28B-201ENST00000390993 C17orf102A2RUQ5 167 aa1.46□□□□□ -2.18
SNORD28B-201ENST00000390993 CXorf65A6NEN9 183 aa1.46□□□□□ -2.18
SNORD28B-201ENST00000390993 MBD3L5A6NJ08 208 aaPredicted RBP1.46□□□□□ -2.18
SNORD28B-201ENST00000390993 KCNJ18B7U540 433 aa1.46□□□□□ -2.18
SNORD28B-201ENST00000390993 EYA2O00167 538 aa1.46□□□□□ -2.18
SNORD28B-201ENST00000390993 LIASO43766 372 aa1.46□□□□□ -2.18
SNORD28B-201ENST00000390993 SERPINI2O75830 405 aa1.46□□□□□ -2.18
SNORD28B-201ENST00000390993 TMCC1O94876 653 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms