RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 KIZQ2M2Z5 673 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 SPANXN3Q5MJ09 141 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 C12orf29Q8N999 325 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 ACMSDQ8TDX5 336 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 TFAP2BQ92481 460 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 DCPSQ96C86 337 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 OTUD5Q96G74 571 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 FAR2Q96K12 515 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 EGFL8Q99944 293 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 SPON2Q9BUD6 331 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 PREBQ9HCU5 417 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 COL20A1Q9P218 1284 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 TOPAZ1Q8N9V7 1692 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 LYPLA2O95372 231 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 CSH1P0DML2 217 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 CSH2P0DML3 217 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 GNAZP19086 355 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 ACO1P21399 889 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 MPSTP25325 297 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 NR2C2P49116 596 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 NEK2P51955 445 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 CNTN2Q02246 1040 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 GBE1Q04446 702 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 CYP51A1Q16850 503 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 BTBD8Q5XKL5 378 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 SAMD7Q7Z3H4 446 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 FAM156AQ8NDB6 213 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 TNIP2Q8NFZ5 429 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 UTP4Q969X6 686 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 RMDN1Q96DB5 314 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 DAPK2Q9UIK4 370 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 PSMD12O00232 456 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 PSMD3O43242 534 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 OAS1P00973 400 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 NFICP08651 508 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 PPARGP37231 505 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 CLK1P49759 484 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 PSMD7P51665 324 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 SLC18A1P54219 525 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 BFSP2Q13515 415 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 SIX1Q15475 284 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 LINC00523Q86TU6 105 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 NAT8LQ8N9F0 302 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 FAM47BQ8NA70 645 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 SLC35B2Q8TB61 432 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 ZNF516Q92618 1163 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 STN1Q9H668 368 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 DOLKQ9UPQ8 538 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 ATP6AP2A0A1C7CYW4 349 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 CXorf49A8MYA2 514 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 MYO1GB0I1T2 1018 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 ATP6AP2O75787 350 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 LRPAP1P30533 357 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 CAPSQ13938 189 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 MAPK11Q15759 364 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 LY6KQ17RY6 165 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 GPR107Q5VW38 600 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 DSELQ8IZU8 1212 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 DEFB106AQ8N104 65 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 PLD5Q8N7P1 536 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 RP9Q8TA86 221 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 CALML6Q8TD86 181 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 CIB1Q99828 191 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 CDH19Q9H159 772 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 WDCPQ9H6R7 721 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 POLR1BQ9H9Y6 1135 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 EFR3BQ9Y2G0 817 aa13.41□□□□□ -0.26
TRAPPC9-201ENST00000389328 IVDP26440 423 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 INPP1P49441 399 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 BCAT1P54687 386 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 SAMD4BQ5PRF9 694 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 TREML1Q86YW5 311 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 DHRSXQ8N5I4 330 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 FICDQ9BVA6 458 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 SYBUQ9NX95 663 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 COPG2Q9UBF2 871 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 A6NHS1 94 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 NCF1BA6NI72 391 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 NCF1CA8MVU1 366 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 NCF1P14598 390 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 SH3BP5LQ7L8J4 393 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 KCTD4Q8WVF5 259 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 RTKNQ9BST9 563 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 THUMPD3Q9BV44 507 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 ST6GALNAC4Q9H4F1 302 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 POMKQ9H5K3 350 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 RUBCNLQ9H714 662 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 PCDH18Q9HCL0 1135 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 MYOZ2Q9NPC6 264 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 CCDC189A1A4V9 331 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 APOA1P02647 267 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 HNRNPLP14866 589 aaKnown RBP eCLIP13.4□□□□□ -0.265e-7■■■■□ 21.6
TRAPPC9-201ENST00000389328 GOT1P17174 413 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 TSPAN8P19075 237 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 ATP6V1B2P21281 511 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 BACE1P56817 501 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 LPIN1Q14693 890 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 MTX3Q5HYI7 312 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 CDCA2Q69YH5 1023 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 ZNF470Q6ECI4 717 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms