RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 TNFSF12-TNFSF13A0A0A6YY99 330 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 M0R3H8 397 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 LRP3O75074 770 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 ENO3P13929 434 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 CPEP16870 476 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 HDCP19113 662 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 ADORA2AP29274 412 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 JAK3P52333 1124 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 MLC1Q15049 377 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 WSCD2Q2TBF2 565 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 GLIPR1L2Q4G1C9 344 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 TIFABQ6ZNK6 161 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 FGD2Q7Z6J4 655 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 SLC9B2Q86UD5 537 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 ZNF654Q8IZM8 581 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 ABRAQ8N0Z2 381 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 METTL27Q8N6F8 245 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 ST13P5Q8NFI4 369 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 EAF2Q96CJ1 260 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 APOLD1Q96LR9 279 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 WDR77Q9BQA1 342 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 SOSTQ9BQB4 213 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 TANGO6Q9C0B7 1094 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 ZNF700Q9H0M5 742 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 CHST8Q9H2A9 424 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 ASB8Q9H765 288 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 IFT122Q9HBG6 1241 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 USP29Q9HBJ7 922 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 USP9YO00507 2555 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 MYO18BQ8IUG5 2567 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 COL12A1Q99715 3063 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 ZNF462Q96JM2 2506 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 ABCA7Q8IZY2 2146 aa-0.38□□□□□ -2.47
RNU6-540P-201ENST00000384622 CUL9Q8IWT3 2517 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 C16orf96A6NNT2 1141 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 STRNO43815 780 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 CEP104O60308 925 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 SLITRK3O94933 977 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 GNAI2P04899 355 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 ATXN1LP0C7T5 689 aaKnown RBP-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 ZNF17P17021 662 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 ZNF19P17023 458 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 ACVR2AP27037 513 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 LSP1P33241 339 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 IDUAP35475 653 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 CARSP49589 748 aaKnown RBP-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 HOXA1P49639 335 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 POLE2P56282 527 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 LILRA4P59901 499 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 ZBTB17Q13105 803 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 NEDD9Q14511 834 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 RAB39AQ14964 217 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 UGT8Q16880 541 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 C15orf32Q32M92 178 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 KRTAP19-7Q3SYF9 63 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 XKR9Q5GH70 373 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 PPP1R32Q7Z5V6 425 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 GPD1LQ8N335 351 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 RNF152Q8N8N0 203 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 ZNF441Q8N8Z8 693 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 ZNF610Q8N9Z0 462 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 OR2T6Q8NHC8 308 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 RASL10AQ92737 203 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 CELF1Q92879 486 aaKnown RBP-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 CTHRC1Q96CG8 243 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 OMA1Q96E52 524 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 CLMNQ96JQ2 1002 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 GPATCH1Q9BRR8 931 aaKnown RBP-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 TRIM6Q9C030 488 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 SLITRK2Q9H156 845 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 MS4A5Q9H3V2 200 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 PDFQ9HBH1 243 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 SPAG4Q9NPE6 437 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 IFT57Q9NWB7 429 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 ASIC3Q9UHC3 531 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 AGO1Q9UL18 857 aaKnown RBP-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 FZD4Q9ULV1 537 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 EXOGQ9Y2C4 368 aaKnown RBP-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 MRPS23Q9Y3D9 190 aaKnown RBP-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 NBEAL1Q6ZS30 2694 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 GPR179Q6PRD1 2367 aa-0.39□□□□□ -2.47
RNU6-540P-201ENST00000384622 USP9XQ93008 2570 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 EPG5Q9HCE0 2579 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 IGKV1D-17A0A075B6S4 117 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 C1orf226A1L170 272 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 FAM171A2A8MVW0 826 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 hCG_1984214I3L0E3 225 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 CAPN9O14815 690 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 ZSCAN9O15535 394 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 ADCY3O60266 1144 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 ZEB2O60315 1214 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 KDM1AO60341 852 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 WNT1P04628 370 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 CSF1RP07333 972 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 GJB1P08034 283 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 FRMD6-AS1P0C7T7 363 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 SLC5A1P13866 664 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 NAGAP17050 411 aa-0.4□□□□□ -2.47
RNU6-540P-201ENST00000384622 CD53P19397 219 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms