RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 SLC22A1O15245 554 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 DHX15O43143 795 aaKnown RBP10.07□□□□□ -0.8
VLDLR-203ENST00000382100 GRIA1P42261 906 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 NEK3P51956 506 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 RPP38P78345 283 aaKnown RBP10.07□□□□□ -0.8
VLDLR-203ENST00000382100 CDH17Q12864 832 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 C12orf56Q8IXR9 622 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 FAM126BQ8IXS8 530 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 TMEM192Q8IY95 271 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 FMR1NBQ8N0W7 255 aaPredicted RBP10.07□□□□□ -0.8
VLDLR-203ENST00000382100 FRMD6Q96NE9 622 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 SERPINB11Q96P15 392 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 GORASP1Q9BQQ3 440 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 FAIM2Q9BWQ8 316 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 AP1M1Q9BXS5 423 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 RASSF1Q9NS23 344 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 PDE2AO00408 941 aaPredicted RBP10.07□□□□□ -0.8
VLDLR-203ENST00000382100 CYP2A7P20853 494 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 ASMTP46597 345 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 CLK3P49761 638 aaKnown RBP10.07□□□□□ -0.8
VLDLR-203ENST00000382100 RASGEF1BQ0VAM2 473 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 ZNHIT3Q15649 155 aaPredicted RBP10.07□□□□□ -0.8
VLDLR-203ENST00000382100 PDPK2PQ6A1A2 396 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 RIT2Q99578 217 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 TFCP2L1Q9NZI6 479 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 SPASTQ9UBP0 616 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 RAB21Q9UL25 225 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 SAMD4AQ9UPU9 718 aaKnown RBP10.07□□□□□ -0.8
VLDLR-203ENST00000382100 MRPS33Q9Y291 106 aaKnown RBP10.07□□□□□ -0.8
VLDLR-203ENST00000382100 USP6P35125 1406 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 A0A087X1B8 175 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 LRRC14BA6NHZ5 514 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 TLX1P31314 330 aaPredicted RBP10.07□□□□□ -0.8
VLDLR-203ENST00000382100 LSM12Q3MHD2 195 aaKnown RBP10.07□□□□□ -0.8
VLDLR-203ENST00000382100 PPP1R14AQ96A00 147 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 SLC13A1Q9BZW2 595 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 RETREG1Q9H6L5 497 aa10.07□□□□□ -0.8
VLDLR-203ENST00000382100 C1orf232A0A0U1RR37 186 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 RAB19A4D1S5 217 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 FAM86C2PA6NEL3 165 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 ALDH6A1Q02252 535 aaKnown RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 LRRC69Q6ZNQ3 347 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 GATAD2AQ86YP4 633 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 GANCQ8TET4 914 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 SLC9A7Q96T83 725 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 ZSWIM1Q9BR11 485 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 ACTR6Q9GZN1 396 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 SARS2Q9NP81 518 aaKnown RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 NXF1Q9UBU9 619 aaKnown RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 UBQLN1Q9UMX0 589 aaKnown RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 MED12Q93074 2177 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 RRN3P2A6NIE6 340 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 PRKCEQ02156 737 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 XKR3Q5GH77 459 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 ADAT2Q7Z6V5 191 aaKnown RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 ZNF512BQ96KM6 892 aaPredicted RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 ANAPC2Q9UJX6 822 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 MAPTP10636 758 aaKnown RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 CYP27A1Q02318 531 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 ENGASEQ8NFI3 743 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 VPS35Q96QK1 796 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 RBM4BQ9BQ04 359 aaKnown RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 SPOCK3Q9BQ16 436 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 RBM4Q9BWF3 364 aaKnown RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 MYNNQ9NPC7 610 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 HSPBP1Q9NZL4 362 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 RPS6KL1Q9Y6S9 549 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 GRAP2O75791 330 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 GPR15P49685 360 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 PRKG2Q13237 762 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 RPTNQ6XPR3 784 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 DHDDSQ86SQ9 333 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 APOBEC3FQ8IUX4 373 aaKnown RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 SEPT5Q99719 369 aaPredicted RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 TDRKHQ9Y2W6 561 aaKnown RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 GIT1Q9Y2X7 761 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 DYRK1BQ9Y463 629 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 CLCA1A8K7I4 914 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 NPIPA7E9PJI5 369 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 H7C1W4 665 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 MAGEC1O60732 1142 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 NPIPA8P0DM63 369 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 PVALBP20472 110 aaPredicted RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 COASYQ13057 564 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 C1orf189Q5VU69 101 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 NAT16Q8N8M0 369 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 ZBTB10Q96DT7 871 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 SGF29Q96ES7 293 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 IL22Q9GZX6 179 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 DHX35Q9H5Z1 703 aaKnown RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 RC3H2Q9HBD1 1191 aaKnown RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 POLR1DQ9Y2S0 133 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 TTC26A0AVF1 554 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 NMT2O60551 498 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 AP2S1P53680 142 aaPredicted RBP10.06□□□□□ -0.8
VLDLR-203ENST00000382100 PCID2Q5JVF3 399 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 ADAMTSL2Q86TH1 951 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 TGFBRAP1Q8WUH2 860 aa10.06□□□□□ -0.8
VLDLR-203ENST00000382100 FAM84AQ96KN4 292 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms