RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 NT5C3BQ969T7 300 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 CDCA5Q96FF9 252 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 NR1H4Q96RI1 486 aaPredicted RBP16.72■□□□□ 0.27
VPS16-203ENST00000380469 NPY6RQ99463 290 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 HNRNPABQ99729 332 aaKnown RBP16.72■□□□□ 0.27
VPS16-203ENST00000380469 LRRC4Q9HBW1 653 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 DDX43Q9NXZ2 648 aaKnown RBP16.72■□□□□ 0.27
VPS16-203ENST00000380469 BFARQ9NZS9 450 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 GJD2Q9UKL4 321 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 TKTP29401 623 aaKnown RBP16.71■□□□□ 0.27
VPS16-203ENST00000380469 CFAP157Q5JU67 520 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 STRA8Q7Z7C7 330 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 SIX6OS1Q8N1H7 587 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.71■□□□□ 0.27
VPS16-203ENST00000380469 WNT8BQ93098 351 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 FCRL3Q96P31 734 aaPredicted RBP16.71■□□□□ 0.27
VPS16-203ENST00000380469 RBBP8Q99708 897 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 S100A14Q9HCY8 104 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 PPM1HQ9ULR3 514 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 CDY2AQ9Y6F7 541 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 CDY1Q9Y6F8 540 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 SNAI1O95863 264 aaPredicted RBP16.71■□□□□ 0.27
VPS16-203ENST00000380469 MPOP05164 745 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 SMPD1P17405 629 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 CACNA2D1P54289 1103 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 PITX1P78337 314 aaPredicted RBP16.71■□□□□ 0.27
VPS16-203ENST00000380469 SNAPC2Q13487 334 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 DPYSQ14117 519 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 FSCBQ5H9T9 825 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 OR52E8Q6IFG1 317 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 DNAAF3Q8N9W5 541 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 NLGN2Q8NFZ4 835 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 GATA6Q92908 595 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 ZNF669Q96BR6 464 aaPredicted RBP16.71■□□□□ 0.27
VPS16-203ENST00000380469 AGAP3Q96P47 875 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 TSC22D3Q99576 134 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 ECSITQ9BQ95 431 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 KATNBL1Q9H079 304 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 VANGL2Q9ULK5 521 aa16.71■□□□□ 0.27
VPS16-203ENST00000380469 E2F8A0AVK6 867 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 KCNK1O00180 336 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 CCNT2O60583 730 aaKnown RBP16.7■□□□□ 0.26
VPS16-203ENST00000380469 DARSP14868 501 aaKnown RBP16.7■□□□□ 0.26
VPS16-203ENST00000380469 NPR3P17342 541 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 CRABP2P29373 138 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 AXLP30530 894 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 DUSP28Q4G0W2 176 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 RALGPS1Q5JS13 557 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 OTUD1Q5VV17 481 aaPredicted RBP16.7■□□□□ 0.26
VPS16-203ENST00000380469 CMC1Q7Z7K0 106 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 ZNF467Q7Z7K2 595 aaPredicted RBP16.7■□□□□ 0.26
VPS16-203ENST00000380469 ADGRG6Q86SQ4 1221 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 TSPAN18Q96SJ8 248 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 ZNF358Q9NW07 568 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 PIN4Q9Y237 131 aaKnown RBP16.7■□□□□ 0.26
VPS16-203ENST00000380469 RAD54BQ9Y620 910 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 CCDC189A1A4V9 331 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 ZNF195O14628 629 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 DCLK1O15075 740 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 HSPA4LO95757 839 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 AP2A1O95782 977 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 HOXD8P13378 290 aaPredicted RBP16.7■□□□□ 0.26
VPS16-203ENST00000380469 WARSP23381 471 aaKnown RBP16.7■□□□□ 0.26
VPS16-203ENST00000380469 MAGEA12P43365 314 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 VWA5B1Q5TIE3 1220 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 NAIF1Q69YI7 327 aaPredicted RBP16.7■□□□□ 0.26
VPS16-203ENST00000380469 BNIPLQ7Z465 357 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 ACTRT2Q8TDY3 377 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 KCTD13Q8WZ19 329 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 ISL2Q96A47 359 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 ATXN7L3BQ96GX2 97 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 MED10Q9BTT4 135 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 PCDHB12Q9Y5F1 795 aa16.7■□□□□ 0.26
VPS16-203ENST00000380469 ENO4A6NNW6 628 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 CLDN5O00501 218 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 NCAM2O15394 837 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 STRNO43815 780 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 USP1O94782 785 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 KCNE1P15382 129 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 PTPN3P26045 913 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 NDUFV1P49821 464 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 LIMK2P53671 638 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 EPHB1P54762 984 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 SYPL2Q5VXT5 272 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 FSTL4Q6MZW2 842 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 ATG14Q6ZNE5 492 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 LIMS2Q7Z4I7 341 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 TNS4Q8IZW8 715 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 SLC2A13Q96QE2 648 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 GOLGA2P5Q9HBQ8 144 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 PIGVQ9NUD9 493 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 SPATS2LQ9NUQ6 558 aaKnown RBP16.69■□□□□ 0.26
VPS16-203ENST00000380469 PDP2Q9P2J9 529 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 ASB3Q9Y575 518 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 MAGEB16A2A368 324 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 USP12O75317 370 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 PTPN1P18031 435 aaKnown RBP16.69■□□□□ 0.26
VPS16-203ENST00000380469 ARRB2P32121 409 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 ADRA1BP35368 520 aa16.69■□□□□ 0.26
VPS16-203ENST00000380469 AIF1P55008 147 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms