RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 PPP1R2P1Q96PQ5 205 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 GBA3Q9H227 469 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 CATSPERBQ9H7T0 1116 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 SMYD2Q9NRG4 433 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 FNIP2Q9P278 1114 aa23.7■■□□□ 1.39
VPS16-201ENST00000380443 A0A1W2PQ45 241 aaPredicted RBP23.7■■□□□ 1.38
VPS16-201ENST00000380443 A0A1W2PQY0 241 aa23.7■■□□□ 1.38
VPS16-201ENST00000380443 MAGEB16A2A368 324 aa23.7■■□□□ 1.38
VPS16-201ENST00000380443 WDR27A2RRH5 827 aa23.7■■□□□ 1.38
VPS16-201ENST00000380443 PIAS1O75925 651 aa23.7■■□□□ 1.38
VPS16-201ENST00000380443 DDHD2O94830 711 aa23.7■■□□□ 1.38
VPS16-201ENST00000380443 GRIA1P42261 906 aa23.7■■□□□ 1.38
VPS16-201ENST00000380443 ZNF276Q8N554 614 aa23.7■■□□□ 1.38
VPS16-201ENST00000380443 FBXO44Q9H4M3 255 aa23.7■■□□□ 1.38
VPS16-201ENST00000380443 MANSC1Q9H8J5 431 aa23.7■■□□□ 1.38
VPS16-201ENST00000380443 PAK6Q9NQU5 681 aaPredicted RBP23.7■■□□□ 1.38
VPS16-201ENST00000380443 CFAP73A6NFT4 308 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 ARVCFO00192 962 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 POLBP06746 335 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 MAGEA11P43364 429 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 PRPSAP1Q14558 356 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 MBTPS1Q14703 1052 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 LHX8Q68G74 356 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 CASC4Q6P4E1 433 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 FAM47EQ6ZV65 393 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 ZNF280BQ86YH2 543 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 LRRC49Q8IUZ0 686 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 CCDC63Q8NA47 563 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 LINC01599Q8WXQ3 324 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 ARNTL2Q8WYA1 636 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 ABCF3Q9NUQ8 709 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 TBC1D13Q9NVG8 400 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 SCML2Q9UQR0 700 aa23.69■■□□□ 1.38
VPS16-201ENST00000380443 GOLGA8RI6L899 631 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 KLF11O14901 512 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 CCNCP24863 283 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 NPY2RP49146 381 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 NIPAL4Q0D2K0 466 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 DBN1Q16643 649 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 STXBP5Q5T5C0 1151 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 MON1AQ86VX9 555 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 NPWQ8N729 165 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 SERPINB11Q96P15 392 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 LRRC40Q9H9A6 602 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 BFARQ9NZS9 450 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 SLC17A7Q9P2U7 560 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 RFPL1O75677 317 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 DCTN3O75935 186 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 CSH1P0DML2 217 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 CSH2P0DML3 217 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 TROVE2P10155 538 aaKnown RBP eCLIP23.68■■□□□ 1.38
VPS16-201ENST00000380443 SELPP16109 830 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 MGAT1P26572 445 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 SKIV2L2P42285 1042 aaKnown RBP23.68■■□□□ 1.38
VPS16-201ENST00000380443 OR1G1P47890 313 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 SLC39A12Q504Y0 691 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 SPDYAQ5MJ70 313 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 TRMT10BQ6PF06 316 aaKnown RBP23.68■■□□□ 1.38
VPS16-201ENST00000380443 KLHDC8BQ8IXV7 354 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 SCAMP5Q8TAC9 235 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 TEKT5Q96M29 485 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 KLF6Q99612 283 aaPredicted RBP23.68■■□□□ 1.38
VPS16-201ENST00000380443 CASS4Q9NQ75 786 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 PHF24Q9UPV7 400 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 PLLPQ9Y342 182 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 NR2E3Q9Y5X4 410 aa23.68■■□□□ 1.38
VPS16-201ENST00000380443 OR6C75A6NL08 312 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 KCNK1O00180 336 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 TADA2AO75478 443 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 TGDSO95455 350 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 SLC2A3P11169 496 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 MGAT5Q09328 741 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 BFSP2Q13515 415 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 CRYMQ14894 314 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 SETDB1Q15047 1291 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 KCTD11Q693B1 232 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 MSANTD2Q6P1R3 559 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 LRRC8DQ7L1W4 858 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 NUP93Q8N1F7 819 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 RAB3IL1Q8TBN0 382 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 TBC1D31Q96DN5 1066 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 SRPK1Q96SB4 655 aaKnown RBP23.67■■□□□ 1.38
VPS16-201ENST00000380443 DONSONQ9NYP3 566 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 PCDHB5Q9Y5E4 795 aa23.67■■□□□ 1.38
VPS16-201ENST00000380443 ATP5HO75947 161 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 AMHP03971 560 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 CRHR1P34998 444 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 SESN2P58004 480 aaPredicted RBP23.66■■□□□ 1.38
VPS16-201ENST00000380443 SLC20A2Q08357 652 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 BNIP1Q12981 228 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 MANEALQ5VSG8 457 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 LINC00523Q86TU6 105 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 DPF3Q92784 378 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 C1orf74Q96LT6 269 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 DEFB118Q96PH6 123 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 OXCT2Q9BYC2 517 aaPredicted RBP23.66■■□□□ 1.38
VPS16-201ENST00000380443 BRCA2P51587 3418 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 GJA8P48165 433 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 SMARCB1Q12824 385 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 SPRED3Q2MJR0 410 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms