RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 ADGRG1Q9Y653 693 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 MIA3Q5JRA6 1907 aa12.28□□□□□ -0.44
PCNA-201ENST00000379143 SPTBN4Q9H254 2564 aa12.27□□□□□ -0.44
PCNA-201ENST00000379143 K7EQS6 105 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 NPC1O15118 1278 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 FGF10O15520 208 aaPredicted RBP12.27□□□□□ -0.45
PCNA-201ENST00000379143 KRT86O43790 486 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 ATG13O75143 517 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 MOCS3O95396 460 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 EGFP01133 1207 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 PABPC1P11940 636 aaKnown RBP12.27□□□□□ -0.45
PCNA-201ENST00000379143 RHOQP17081 205 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 IL1R2P27930 398 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 EPHB2P29323 1055 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 HLA-FP30511 346 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 HOXC13P31276 330 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 NAP1L1P55209 391 aaKnown RBP12.27□□□□□ -0.45
PCNA-201ENST00000379143 MRPS21P82921 87 aaKnown RBP12.27□□□□□ -0.45
PCNA-201ENST00000379143 SLC25A11Q02978 314 aaKnown RBP12.27□□□□□ -0.45
PCNA-201ENST00000379143 CCDC173Q0VFZ6 552 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 SEMA3BQ13214 749 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 FZD5Q13467 585 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 DMC1Q14565 340 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 DPYSL2Q16555 572 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 HSF5Q4G112 596 aaPredicted RBP12.27□□□□□ -0.45
PCNA-201ENST00000379143 C6orf118Q5T5N4 469 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 C11orf63Q6NUN7 778 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 RWDD4Q6NW29 188 aaKnown RBP12.27□□□□□ -0.45
PCNA-201ENST00000379143 CYP4V2Q6ZWL3 525 aaPredicted RBP12.27□□□□□ -0.45
PCNA-201ENST00000379143 TRMT11Q7Z4G4 463 aaKnown RBP12.27□□□□□ -0.45
PCNA-201ENST00000379143 POLNQ7Z5Q5 900 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 KIAA0907Q7Z7F0 614 aaPredicted RBP12.27□□□□□ -0.45
PCNA-201ENST00000379143 SETD3Q86TU7 594 aaPredicted RBP12.27□□□□□ -0.45
PCNA-201ENST00000379143 PEBP4Q96S96 227 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 LACRTQ9GZZ8 138 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 CHRDQ9H2X0 955 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 CATSPERBQ9H7T0 1116 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 ZWILCHQ9H900 591 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 ABCB8Q9NUT2 735 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 TBC1D30Q9Y2I9 924 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 SNX10Q9Y5X0 201 aa12.27□□□□□ -0.45
PCNA-201ENST00000379143 ZFHX2Q9C0A1 2572 aaPredicted RBP12.26□□□□□ -0.45
PCNA-201ENST00000379143 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 TMEM110-MUSTN1A8MSY1 372 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 FAM72CH0Y354 149 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 EEF2KO00418 725 aaKnown RBP12.26□□□□□ -0.45
PCNA-201ENST00000379143 TRIM24O15164 1050 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 PI15O43692 258 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 CREB3O43889 395 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 BUB1BO60566 1050 aaPredicted RBP12.26□□□□□ -0.45
PCNA-201ENST00000379143 RNF40O75150 1001 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 ATP5BP06576 529 aaKnown RBP12.26□□□□□ -0.45
PCNA-201ENST00000379143 DCNP07585 359 aaKnown RBP12.26□□□□□ -0.45
PCNA-201ENST00000379143 RARAP10276 462 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 OR1E1P30953 314 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 ARL4AP40617 200 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 HCAR3P49019 387 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 MAPKAPK2P49137 400 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 NUBP1P53384 320 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 PTPN5P54829 565 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 TPI1P60174 286 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 MESP2Q0VG99 397 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 GEN1Q17RS7 908 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 SMTNL2Q2TAL5 461 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 ALFQ53S48 1182 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 PPP6R3Q5H9R7 873 aaPredicted RBP12.26□□□□□ -0.45
PCNA-201ENST00000379143 KCNT1Q5JUK3 1230 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 FAM72AQ5TYM5 149 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 LRRC38Q5VT99 294 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 DAB2IPQ5VWQ8 1189 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 FAM72DQ6L9T8 149 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 ZNF783Q6ZMS7 281 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 DAAM2Q86T65 1068 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 FAM72BQ86X60 149 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 CIR1Q86X95 450 aaPredicted RBP12.26□□□□□ -0.45
PCNA-201ENST00000379143 MAP7D3Q8IWC1 876 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 RHOT1Q8IXI2 618 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 PYROXD2Q8N2H3 581 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 RNF10Q8N5U6 811 aaKnown RBP12.26□□□□□ -0.45
PCNA-201ENST00000379143 HSPH1Q92598 858 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.26□□□□□ -0.45
PCNA-201ENST00000379143 TMEM248Q9NWD8 314 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 ELOVL2Q9NXB9 296 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 MPP6Q9NZW5 540 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 DLGAP2Q9P1A6 1054 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 RCOR3Q9P2K3 495 aaPredicted RBP12.26□□□□□ -0.45
PCNA-201ENST00000379143 CLEC4EQ9ULY5 219 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 TFR2Q9UP52 801 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 ZDBF2Q9HCK1 2354 aa12.26□□□□□ -0.45
PCNA-201ENST00000379143 WASH4PA8MWX3 477 aa12.25□□□□□ -0.45
PCNA-201ENST00000379143 CHURC1-FNTBB4DL54 471 aa12.25□□□□□ -0.45
PCNA-201ENST00000379143 PRRT4C9JH25 899 aa12.25□□□□□ -0.45
PCNA-201ENST00000379143 H3BRJ5 948 aa12.25□□□□□ -0.45
PCNA-201ENST00000379143 DAPK3O43293 454 aa12.25□□□□□ -0.45
PCNA-201ENST00000379143 BUB1O43683 1085 aa12.25□□□□□ -0.45
PCNA-201ENST00000379143 SPOPO43791 374 aa12.25□□□□□ -0.45
PCNA-201ENST00000379143 CNTN5O94779 1100 aa12.25□□□□□ -0.45
PCNA-201ENST00000379143 ASLP04424 464 aa12.25□□□□□ -0.45
PCNA-201ENST00000379143 RHOCP08134 193 aa12.25□□□□□ -0.45
PCNA-201ENST00000379143 HNRNPLP14866 589 aaKnown RBP eCLIP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms