RNA–Protein interactions for RNA: ENST00000378752.7

OPTN-204, Transcript of optineurin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene OPTN, Length 3,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-204ENST00000378752 SLC10A2Q12908 348 aaPredicted RBP9.41□□□□□ -0.9
OPTN-204ENST00000378752 KIF19Q2TAC6 998 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 SEL1L3Q68CR1 1132 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 SLC9A4Q6AI14 798 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 TRNP1Q6NT89 227 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 KLHDC10Q6PID8 442 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 GK5Q6ZS86 529 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 LPCAT2Q7L5N7 544 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 CTU1Q7Z7A3 348 aaKnown RBP9.41□□□□□ -0.9
OPTN-204ENST00000378752 RTKN2Q8IZC4 609 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 DSELQ8IZU8 1212 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 CYGBQ8WWM9 190 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 SIGLEC10Q96LC7 697 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 PDGFDQ9GZP0 370 aaPredicted RBP9.41□□□□□ -0.9
OPTN-204ENST00000378752 DHX33Q9H6R0 707 aaKnown RBP9.41□□□□□ -0.9
OPTN-204ENST00000378752 WDR41Q9HAD4 459 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 ATXN10Q9UBB4 475 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 PCDHA11Q9Y5I1 949 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 PRRC2BQ5JSZ5 2229 aaKnown RBP9.41□□□□□ -0.9
OPTN-204ENST00000378752 NEMP2A6NFY4 417 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 CRTAMO95727 393 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 TFPTP0C1Z6 253 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 GABRB2P47870 512 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 BACE1P56817 501 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 TNFAIP1Q13829 316 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 POU6F1Q14863 301 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 PCLAFQ15004 111 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 MTX3Q5HYI7 312 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 STYK1Q6J9G0 422 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 LRRC8BQ6P9F7 803 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 B3GNT6Q6ZMB0 384 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 CLVS1Q8IUQ0 354 aaPredicted RBP9.41□□□□□ -0.9
OPTN-204ENST00000378752 NUP93Q8N1F7 819 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.41□□□□□ -0.9
OPTN-204ENST00000378752 KCTD4Q8WVF5 259 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 SLC39A3Q9BRY0 314 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 PRDM12Q9H4Q4 367 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 CNTN3Q9P232 1028 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 DCDC2Q9UHG0 476 aa9.41□□□□□ -0.9
OPTN-204ENST00000378752 SPRP35270 261 aaPredicted RBP9.4□□□□□ -0.9
OPTN-204ENST00000378752 GPD2P43304 727 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 RPL5P46777 297 aaKnown RBP9.4□□□□□ -0.9
OPTN-204ENST00000378752 INHBCP55103 352 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 SURF1Q15526 300 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 PCSK7Q16549 785 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 MBLAC2Q68D91 279 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 APLFQ8IW19 511 aaPredicted RBP9.4□□□□□ -0.9
OPTN-204ENST00000378752 EMID1Q96A84 441 aaPredicted RBP9.4□□□□□ -0.9
OPTN-204ENST00000378752 DHRS4Q9BTZ2 278 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 DPP3Q9NY33 737 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 LMCD1Q9NZU5 365 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 HACL1Q9UJ83 578 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 SCN9AQ15858 1988 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 CNTNAP1P78357 1384 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 C2CD4BA6NLJ0 364 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 M0QYT0 321 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 TRDMT1O14717 391 aaKnown RBP9.4□□□□□ -0.9
OPTN-204ENST00000378752 PPEF2O14830 753 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 MFSD11O43934 449 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 MSCO60682 206 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 VDRP11473 427 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 CKMT2P17540 419 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 PSMD7P51665 324 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 CCR3P51677 355 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 TPD52P55327 224 aaPredicted RBP9.4□□□□□ -0.9
OPTN-204ENST00000378752 CTBP1Q13363 440 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 RPS6KA2Q15349 733 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 AGKQ53H12 422 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 TEX44Q53QW1 395 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 FBXO48Q5FWF7 155 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 KYAT3Q6YP21 454 aaKnown RBP9.4□□□□□ -0.9
OPTN-204ENST00000378752 RDM1Q8NG50 284 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 TMIGD2Q96BF3 282 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 PKP2Q99959 881 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 MRPL45Q9BRJ2 306 aaKnown RBP9.4□□□□□ -0.9
OPTN-204ENST00000378752 GATA5Q9BWX5 397 aaPredicted RBP9.4□□□□□ -0.9
OPTN-204ENST00000378752 TRIM8Q9BZR9 551 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 NMRAL1Q9HBL8 299 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 LRRC4Q9HBW1 653 aa9.4□□□□□ -0.9
OPTN-204ENST00000378752 ARHGAP10A1A4S6 786 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 HMX2A2RU54 273 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 ZNF839A8K0R7 811 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 TRIM13O60858 407 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 C2P06681 752 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 THRAP10827 490 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 ARL2P36404 184 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 GRIA4P48058 902 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 AP3M2P53677 418 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 PITX1P78337 314 aaPredicted RBP9.4□□□□□ -0.91
OPTN-204ENST00000378752 TBCCQ15814 346 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 LSM12Q3MHD2 195 aaKnown RBP9.4□□□□□ -0.91
OPTN-204ENST00000378752 NAPRTQ6XQN6 538 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 TRIM74Q86UV6 250 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 TRIM73Q86UV7 250 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 MICALL2Q8IY33 904 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 NAT16Q8N8M0 369 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 RNF169Q8NCN4 708 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 IPMKQ8NFU5 416 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 GRIN3AQ8TCU5 1115 aa9.4□□□□□ -0.91
OPTN-204ENST00000378752 ZFAND2BQ8WV99 257 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms