RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 EBNA1BP2Q99848 306 aaKnown RBP13.47□□□□□ -0.25
NPHP4-203ENST00000378169 MECRQ9BV79 373 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 NMRAL1Q9HBL8 299 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 PCDHGB4Q9UN71 923 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 TELO2Q9Y4R8 837 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 DDHD2O94830 711 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 CDK16Q00536 496 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 BST1Q10588 318 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 NOMO1Q15155 1222 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 DCAF12L1Q5VU92 463 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 ANKRD22Q5VYY1 191 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 PDPK2PQ6A1A2 396 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 NEPROQ6NW34 567 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 C16orf59Q7L2K0 433 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 DEFB107AQ8IZN7 70 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 CATSPER2Q96P56 530 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 CIPCQ9C0C6 399 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 WWOXQ9NZC7 414 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 PRDM4Q9UKN5 801 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 SYNDIG1LA6NDD5 238 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 CFAP99D6REC4 459 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 MSI1O43347 362 aaKnown RBP13.47□□□□□ -0.25
NPHP4-203ENST00000378169 KCNA3P22001 575 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 NPY2RP49146 381 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 SP3Q02447 781 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 FUT11Q495W5 492 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 TNS4Q8IZW8 715 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 PYROXD2Q8N2H3 581 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 CPT1BQ92523 772 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 EXOC2Q96KP1 924 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 TWNKQ96RR1 684 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 CDHR5Q9HBB8 845 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 HEATR9A2RTY3 570 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 MYO1DO94832 1006 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 CRTAMO95727 393 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 SERPIND1P05546 499 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 THRAP10827 490 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 MYL4P12829 197 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 CCNB1P14635 433 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 ABCE1P61221 599 aaKnown RBP13.47□□□□□ -0.25
NPHP4-203ENST00000378169 STX5Q13190 355 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 SPANXN3Q5MJ09 141 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 GRTP1Q5TC63 336 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 SPRYD7Q5W111 196 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 ADCK2Q7Z695 626 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 SETD3Q86TU7 594 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-203ENST00000378169 CEP70Q8NHQ1 597 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 SPOCK2Q92563 424 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 FBXL18Q96ME1 805 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 VAT1Q99536 393 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 SH3GL2Q99962 352 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 UBXN6Q9BZV1 441 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 SENP6Q9GZR1 1112 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-203ENST00000378169 EFCAB1Q9HAE3 211 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 DLGAP2Q9P1A6 1054 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 TAGLN3Q9UI15 199 aa13.47□□□□□ -0.25
NPHP4-203ENST00000378169 PRR23AA6NEV1 266 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 XPO1O14980 1071 aaKnown RBP13.46□□□□□ -0.25
NPHP4-203ENST00000378169 FAM155BO75949 473 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 ADRA1BP35368 520 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 KCNK10P57789 538 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 LILRA4P59901 499 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 CMC1Q7Z7K0 106 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 USP13Q92995 863 aaPredicted RBP13.46□□□□□ -0.25
NPHP4-203ENST00000378169 CENPTQ96BT3 561 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 CPNE1Q99829 537 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 CLPBQ9H078 707 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 RGS18Q9NS28 235 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 SLC17A7Q9P2U7 560 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 PADI3Q9ULW8 664 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 FAM50BQ9Y247 325 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 NR2E3Q9Y5X4 410 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 ABHD2P08910 425 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 RBP1P09455 135 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 PTGIRP43119 386 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 NDUFV1P49821 464 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 KCNJ2P63252 427 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 SLC25A52Q3SY17 297 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 AGKQ53H12 422 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 SNX31Q8N9S9 440 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 ATAD1Q8NBU5 361 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 NKD2Q969F2 451 aaPredicted RBP13.46□□□□□ -0.25
NPHP4-203ENST00000378169 TBL1YQ9BQ87 522 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 CNGB3Q9NQW8 809 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 GRHL1Q9NZI5 618 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 PCDHGC3Q9UN70 934 aa13.46□□□□□ -0.25
NPHP4-203ENST00000378169 DNAJC8O75937 253 aaPredicted RBP13.46□□□□□ -0.26
NPHP4-203ENST00000378169 ATP6V1G2O95670 118 aa13.46□□□□□ -0.26
NPHP4-203ENST00000378169 SH3BGRP55822 239 aaPredicted RBP13.46□□□□□ -0.26
NPHP4-203ENST00000378169 NOMO2Q5JPE7 1267 aa13.46□□□□□ -0.26
NPHP4-203ENST00000378169 TMEM154Q6P9G4 183 aa13.46□□□□□ -0.26
NPHP4-203ENST00000378169 FNIP1Q8TF40 1166 aa13.46□□□□□ -0.26
NPHP4-203ENST00000378169 FCRL2Q96LA5 508 aaPredicted RBP13.46□□□□□ -0.26
NPHP4-203ENST00000378169 BRD8Q9H0E9 1235 aa13.46□□□□□ -0.26
NPHP4-203ENST00000378169 DCLRE1BQ9H816 532 aa13.46□□□□□ -0.26
NPHP4-203ENST00000378169 SLC13A4Q9UKG4 626 aa13.46□□□□□ -0.26
NPHP4-203ENST00000378169 GON4LQ3T8J9 2241 aa13.45□□□□□ -0.26
NPHP4-203ENST00000378169 TTLL13PA6NNM8 815 aa13.45□□□□□ -0.26
NPHP4-203ENST00000378169 PDE5AO76074 875 aa13.45□□□□□ -0.26
NPHP4-203ENST00000378169 TOMM70O94826 608 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms