RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CACNA2D1P54289 1103 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 RUNX1T1Q06455 604 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 CNTN1Q12860 1018 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 ARSHQ5FYA8 562 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 DCLRE1AQ6PJP8 1040 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 PCYOX1LQ8NBM8 494 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 CASP10Q92851 521 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 FAM111AQ96PZ2 611 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 SH3GL1Q99961 368 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 PABPC3Q9H361 631 aaKnown RBP11.04□□□□□ -0.64
HIF3A-205ENST00000377670 CAB39Q9Y376 341 aaPredicted RBP11.04□□□□□ -0.64
HIF3A-205ENST00000377670 ADRB2P07550 413 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 PSMA3P25788 255 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 TNFSF9P41273 254 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 DHPSP49366 369 aaPredicted RBP11.04□□□□□ -0.64
HIF3A-205ENST00000377670 DUSP28Q4G0W2 176 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 SNAP47Q5SQN1 464 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 AADACL2Q6P093 401 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 FAM131BQ86XD5 332 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 SCUBE1Q8IWY4 988 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 ZSWIM1Q9BR11 485 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 RNPEPQ9H4A4 650 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 SYNPO2Q9UMS6 1093 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 RNF225M0QZC1 329 aaPredicted RBP11.04□□□□□ -0.64
HIF3A-205ENST00000377670 SERPINA4P29622 427 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 OR1D2P34982 312 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 POU4F1Q01851 419 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 CCDC142Q17RM4 750 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 MYOCQ99972 504 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 BCAS3Q9H6U6 928 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 SCN3BQ9NY72 215 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 FAM153AQ9UHL3 310 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 GIT1Q9Y2X7 761 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 LACTBL1A8MY62 500 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 DDX3XO00571 662 aaKnown RBP eCLIP11.04□□□□□ -0.64
HIF3A-205ENST00000377670 SOAT2O75908 522 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 MROH9Q5TGP6 573 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 SLC13A5Q86YT5 568 aaPredicted RBP11.04□□□□□ -0.64
HIF3A-205ENST00000377670 COLGALT2Q8IYK4 626 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 HDAC7Q8WUI4 952 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 COL20A1Q9P218 1284 aa11.04□□□□□ -0.64
HIF3A-205ENST00000377670 ASTN1O14525 1302 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 E7ENQ6 273 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 TPST1O60507 370 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 POLBP06746 335 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 ERVK-21P61565 698 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 TBX2Q13207 712 aaPredicted RBP11.03□□□□□ -0.64
HIF3A-205ENST00000377670 CYP4X1Q8N118 509 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 TDRD5Q8NAT2 981 aaKnown RBP11.03□□□□□ -0.64
HIF3A-205ENST00000377670 OR8D1Q8WZ84 308 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 MCCC1Q96RQ3 725 aaPredicted RBP11.03□□□□□ -0.64
HIF3A-205ENST00000377670 DCLRE1BQ9H816 532 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 ZFYVE1Q9HBF4 777 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 NDUFA13Q9P0J0 144 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 PAK5Q9P286 719 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 DEC1Q9P2X7 70 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 A0A088AWK7 358 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 ALBP02768 609 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 PSMC3P17980 439 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 ZNF10P21506 573 aaPredicted RBP11.03□□□□□ -0.64
HIF3A-205ENST00000377670 OASLQ15646 514 aaKnown RBP11.03□□□□□ -0.64
HIF3A-205ENST00000377670 MIIPQ5JXC2 388 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 USP45Q70EL2 814 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 STX19Q8N4C7 294 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 MPP4Q96JB8 637 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 SERAC1Q96JX3 654 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 GPR20Q99678 358 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 AP4S1Q9Y587 144 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 COPG1Q9Y678 874 aaKnown RBP11.03□□□□□ -0.64
HIF3A-205ENST00000377670 FOSL2P15408 326 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 GLRA2P23416 452 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 SNRPD1P62314 119 aaKnown RBP11.03□□□□□ -0.64
HIF3A-205ENST00000377670 IYDQ6PHW0 289 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 SLC24A5Q71RS6 500 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 MARK2Q7KZI7 788 aaKnown RBP11.03□□□□□ -0.64
HIF3A-205ENST00000377670 MTDHQ86UE4 582 aaKnown RBP11.03□□□□□ -0.64
HIF3A-205ENST00000377670 HORMAD1Q86X24 394 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 KIAA0319LQ8IZA0 1049 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 MCRS1Q96EZ8 462 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 C17orf80Q9BSJ5 609 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 CEP41Q9BYV8 373 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 BARX2Q9UMQ3 279 aaPredicted RBP11.03□□□□□ -0.64
HIF3A-205ENST00000377670 UBIAD1Q9Y5Z9 338 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 BCL9LQ86UU0 1499 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 B4GALT5O43286 388 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 NBNO60934 754 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 USP1O94782 785 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 CLPTM1O96005 669 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 SERPINF2P08697 491 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 KELP23276 732 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 ADIGQ0VDE8 80 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 RRP1BQ14684 758 aaKnown RBP11.03□□□□□ -0.64
HIF3A-205ENST00000377670 PLEKHM3Q6ZWE6 761 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 ARHGAP22Q7Z5H3 698 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 ADAM32Q8TC27 787 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 KLHL4Q9C0H6 718 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 CREBZFQ9NS37 354 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 GRID1Q9ULK0 1009 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 SLC27A5Q9Y2P5 690 aa11.03□□□□□ -0.64
HIF3A-205ENST00000377670 SCAMP3O14828 347 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms