RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 ECT2LQ008S8 904 aa19.12■□□□□ 0.65
HDAC6-202ENST00000376610 ARID5BQ14865 1188 aa19.12■□□□□ 0.65
HDAC6-202ENST00000376610 DENND1BQ6P3S1 775 aa19.12■□□□□ 0.65
HDAC6-202ENST00000376610 ATP6V0D2Q8N8Y2 350 aa19.12■□□□□ 0.65
HDAC6-202ENST00000376610 BAHD1Q8TBE0 780 aaPredicted RBP19.12■□□□□ 0.65
HDAC6-202ENST00000376610 MYO19Q96H55 970 aa19.12■□□□□ 0.65
HDAC6-202ENST00000376610 SRRTQ9BXP5 876 aaKnown RBP19.12■□□□□ 0.65
HDAC6-202ENST00000376610 SLC4A5Q9BY07 1137 aa19.12■□□□□ 0.65
HDAC6-202ENST00000376610 CCDC86Q9H6F5 360 aaKnown RBP19.12■□□□□ 0.65
HDAC6-202ENST00000376610 INTS6Q9UL03 887 aaKnown RBP19.12■□□□□ 0.65
HDAC6-202ENST00000376610 LHX6Q9UPM6 363 aa19.12■□□□□ 0.65
HDAC6-202ENST00000376610 CNTN6Q9UQ52 1028 aa19.12■□□□□ 0.65
HDAC6-202ENST00000376610 DMXL2Q8TDJ6 3036 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 SPEGQ15772 3267 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 A0A1W2PP55 124 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 GOLGA8CPA6NN73 597 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 E5RJQ4 531 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 MID1O15344 667 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 TRUB2O95900 331 aaKnown RBP19.11■□□□□ 0.65
HDAC6-202ENST00000376610 SLC2A3P11169 496 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 TACR2P21452 398 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 ZC3H12AQ5D1E8 599 aaKnown RBP19.11■□□□□ 0.65
HDAC6-202ENST00000376610 FSCBQ5H9T9 825 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 SYPL2Q5VXT5 272 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 RAP1GAP2Q684P5 730 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 MMS22LQ6ZRQ5 1243 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 MMAAQ8IVH4 418 aaKnown RBP19.11■□□□□ 0.65
HDAC6-202ENST00000376610 MRGPRX3Q96LB0 322 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 THAP9Q9H5L6 903 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 FAM204AQ9H8W3 233 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.11■□□□□ 0.65
HDAC6-202ENST00000376610 FZD4Q9ULV1 537 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 PTPRBP23467 1997 aa19.11■□□□□ 0.65
HDAC6-202ENST00000376610 ITIH6Q6UXX5 1313 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 APC2O95996 2303 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 A0A1W2PPC4 97 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 TTC34A8MYJ7 566 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 PAPSS1O43252 624 aaPredicted RBP19.1■□□□□ 0.65
HDAC6-202ENST00000376610 TNFSF14O43557 240 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 PCDHGA12O60330 932 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 ADH1BP00325 375 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 IGHV4-34P06331 123 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 ATXN1LP0C7T5 689 aaKnown RBP19.1■□□□□ 0.65
HDAC6-202ENST00000376610 ABCB4P21439 1286 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 BMP6P22004 513 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 SLC8A1P32418 973 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 USP8P40818 1118 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 CTSKP43235 329 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 GALCP54803 685 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 SULT2A1Q06520 285 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 SLC12A1Q13621 1099 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 RABGAP1LQ5R372 815 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 C9orf64Q5T6V5 341 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 TTC39BQ5VTQ0 682 aaPredicted RBP19.1■□□□□ 0.65
HDAC6-202ENST00000376610 NCEH1Q6PIU2 408 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 LAYNQ6UX15 382 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 SND1Q7KZF4 910 aaKnown RBP eCLIP19.1■□□□□ 0.65
HDAC6-202ENST00000376610 TMEM110Q86TL2 294 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 GALNT15Q8N3T1 639 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 OR2T34Q8NGX1 318 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 ZNF606Q8WXB4 792 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 RNF34Q969K3 372 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 MYEOVQ96EZ4 313 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 PPP1R9BQ96SB3 815 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 ADAMTS1Q9UHI8 967 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 TPX2Q9ULW0 747 aaKnown RBP19.1■□□□□ 0.65
HDAC6-202ENST00000376610 BTBD3Q9Y2F9 522 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 TP53BP1Q12888 1972 aaPredicted RBP19.1■□□□□ 0.65
HDAC6-202ENST00000376610 PLXNB3Q9ULL4 1909 aa19.1■□□□□ 0.65
HDAC6-202ENST00000376610 H0Y8X5 98 aa19.09■□□□□ 0.65
HDAC6-202ENST00000376610 KCNK3O14649 394 aa19.09■□□□□ 0.65
HDAC6-202ENST00000376610 VILLO15195 856 aa19.09■□□□□ 0.65
HDAC6-202ENST00000376610 CTSOP43234 321 aaPredicted RBP19.09■□□□□ 0.65
HDAC6-202ENST00000376610 PSMD8P48556 350 aa19.09■□□□□ 0.65
HDAC6-202ENST00000376610 OXCT1P55809 520 aa19.09■□□□□ 0.65
HDAC6-202ENST00000376610 CDK17Q00537 523 aa19.09■□□□□ 0.65
HDAC6-202ENST00000376610 PDCLQ13371 301 aa19.09■□□□□ 0.65
HDAC6-202ENST00000376610 TMPRSS7Q7RTY8 843 aa19.09■□□□□ 0.65
HDAC6-202ENST00000376610 CREBRFQ8IUR6 639 aa19.09■□□□□ 0.65
HDAC6-202ENST00000376610 NOX5Q96PH1 765 aa19.09■□□□□ 0.65
HDAC6-202ENST00000376610 NEUROG2Q9H2A3 272 aa19.09■□□□□ 0.65
HDAC6-202ENST00000376610 AASDHPPTQ9NRN7 309 aa19.09■□□□□ 0.65
HDAC6-202ENST00000376610 FTSJ1Q9UET6 329 aa19.09■□□□□ 0.65
HDAC6-202ENST00000376610 XPO7Q9UIA9 1087 aaKnown RBP19.09■□□□□ 0.65
HDAC6-202ENST00000376610 PLXNA2O75051 1894 aa19.08■□□□□ 0.65
HDAC6-202ENST00000376610 NYNRINQ9P2P1 1898 aaKnown RBP19.08■□□□□ 0.65
HDAC6-202ENST00000376610 KCNU1A8MYU2 1149 aa19.08■□□□□ 0.64
HDAC6-202ENST00000376610 GOT1P17174 413 aa19.08■□□□□ 0.64
HDAC6-202ENST00000376610 C5AR1P21730 350 aa19.08■□□□□ 0.64
HDAC6-202ENST00000376610 CCR1P32246 355 aa19.08■□□□□ 0.64
HDAC6-202ENST00000376610 SNX16P57768 344 aa19.08■□□□□ 0.64
HDAC6-202ENST00000376610 MTA1Q13330 715 aa19.08■□□□□ 0.64
HDAC6-202ENST00000376610 ELAVL3Q14576 367 aaKnown RBP19.08■□□□□ 0.64
HDAC6-202ENST00000376610 CCDC157Q569K6 752 aa19.08■□□□□ 0.64
HDAC6-202ENST00000376610 SLC45A4Q5BKX6 768 aa19.08■□□□□ 0.64
HDAC6-202ENST00000376610 RPL10LQ96L21 214 aaKnown RBP19.08■□□□□ 0.64
HDAC6-202ENST00000376610 SLC6A18Q96N87 628 aa19.08■□□□□ 0.64
HDAC6-202ENST00000376610 DDIT4Q9NX09 232 aa19.08■□□□□ 0.64
HDAC6-202ENST00000376610 TOR4AQ9NXH8 423 aa19.08■□□□□ 0.64
HDAC6-202ENST00000376610 SERGEFQ9UGK8 458 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms