RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 C2CD2LO14523 706 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 PRRG1O14668 218 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 TLL1O43897 1013 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 RNF40O75150 1001 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 HOXA9P31269 272 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 SARNPP82979 210 aaKnown RBP11.42□□□□□ -0.58
PDPN-202ENST00000376057 TWF1Q12792 350 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 AUHQ13825 339 aaKnown RBP11.42□□□□□ -0.58
PDPN-202ENST00000376057 ANKRD22Q5VYY1 191 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 ARHGEF18Q6ZSZ5 1173 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 TMEM150AQ86TG1 271 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 MAML1Q92585 1016 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 LGMNQ99538 433 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 LRRC3Q9BY71 257 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 CCSER2Q9H7U1 834 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 ETNK1Q9HBU6 452 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 RAB6BQ9NRW1 208 aa11.42□□□□□ -0.58
PDPN-202ENST00000376057 A0A087WUV0 522 aaPredicted RBP11.41□□□□□ -0.58
PDPN-202ENST00000376057 SLC12A8A0AV02 714 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 SPDYE4A6NLX3 237 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 AP3B1O00203 1094 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 RNF103O00237 685 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 TGM5O43548 720 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 TMEM63AO94886 807 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 CXCL14O95715 111 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 DNAJC21Q5F1R6 531 aaKnown RBP11.41□□□□□ -0.58
PDPN-202ENST00000376057 TTC39BQ5VTQ0 682 aaPredicted RBP11.41□□□□□ -0.58
PDPN-202ENST00000376057 ITPRIPL1Q6GPH6 555 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 SPPL3Q8TCT6 385 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 TLCD1Q96CP7 247 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 ZNF512Q96ME7 567 aaPredicted RBP11.41□□□□□ -0.58
PDPN-202ENST00000376057 IL12RB2Q99665 862 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 DDX50Q9BQ39 737 aaKnown RBP11.41□□□□□ -0.58
PDPN-202ENST00000376057 STMN4Q9H169 189 aaPredicted RBP11.41□□□□□ -0.58
PDPN-202ENST00000376057 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 C2orf71A6NGG8 1288 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 MATN3O15232 486 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 COCHO43405 550 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 DNAJB2P25686 324 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 PTPN3P26045 913 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 MMP13P45452 471 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 EPHA5P54756 1037 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 YBEYP58557 167 aaPredicted RBP11.41□□□□□ -0.58
PDPN-202ENST00000376057 GABPB1Q06547 395 aaPredicted RBP11.41□□□□□ -0.58
PDPN-202ENST00000376057 AP1B1Q10567 949 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 CCDC38Q502W7 563 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 TEX44Q53QW1 395 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 TTMPQ5BVD1 217 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 CEP85LQ5SZL2 805 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 FAM217AQ8IXS0 508 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 CCDC77Q9BR77 488 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 PSD3Q9NYI0 1048 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 LGALS13Q9UHV8 139 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 TEX264Q9Y6I9 313 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 LINC01553A4QN01 128 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 E7EVH7 732 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 ACSL4O60488 711 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 MAFKO60675 156 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 METTL18O95568 372 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 IVLP07476 585 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 SLC11A2P49281 568 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 BASP1P80723 227 aaKnown RBP11.41□□□□□ -0.58
PDPN-202ENST00000376057 PARP15Q460N3 678 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 ZNF449Q6P9G9 518 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 CHST9Q7L1S5 443 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 C14orf80Q86SX3 495 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 CCNJLQ8IV13 435 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 ZNF567Q8N184 647 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 CCDC110Q8TBZ0 833 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 TEKT5Q96M29 485 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 LBHD1Q9BQE6 289 aaPredicted RBP11.41□□□□□ -0.58
PDPN-202ENST00000376057 GBA3Q9H227 469 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 SNX10Q9Y5X0 201 aa11.41□□□□□ -0.58
PDPN-202ENST00000376057 CHD5Q8TDI0 1954 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 TBX18O95935 607 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 DDX6P26196 483 aaKnown RBP eCLIP11.4□□□□□ -0.58
PDPN-202ENST00000376057 PHBP35232 272 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 HARS2P49590 506 aaKnown RBP11.4□□□□□ -0.58
PDPN-202ENST00000376057 FRG1Q14331 258 aaKnown RBP11.4□□□□□ -0.58
PDPN-202ENST00000376057 FNBP1LQ5T0N5 605 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 TMCO4Q5TGY1 634 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 KCTD11Q693B1 232 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 NADSYN1Q6IA69 706 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 FBXL22Q6P050 247 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 LRRC8BQ6P9F7 803 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 TMC8Q8IU68 726 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 LEMD2Q8NC56 503 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 SIK2Q9H0K1 926 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 SAYSD1Q9NPB0 183 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 ZMYM5Q9UJ78 669 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 MAGED2Q9UNF1 606 aaPredicted RBP11.4□□□□□ -0.58
PDPN-202ENST00000376057 ZNF510Q9Y2H8 683 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 CEP350Q5VT06 3117 aa11.4□□□□□ -0.58
PDPN-202ENST00000376057 CXorf51AA0A1B0GTR3 108 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 TCRBV7S3A2A0A539 114 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 GFRA2O00451 464 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 TRDMT1O14717 391 aaKnown RBP11.4□□□□□ -0.59
PDPN-202ENST00000376057 AGTP01019 485 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 SRGAP2BP0DMP2 458 aa11.4□□□□□ -0.59
PDPN-202ENST00000376057 TACR2P21452 398 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms