RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 NAIF1Q69YI7 327 aaPredicted RBP13.97□□□□□ -0.17
COL4A1-201ENST00000375820 SYT12Q8IV01 421 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 AHI1Q8N157 1196 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 MYLK2Q9H1R3 596 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 SPG21Q9NZD8 308 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 LACTBL1A8MY62 500 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 GRIN3BO60391 1043 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 KRT6AP02538 564 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 HMGCRP04035 888 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 KRT6BP04259 564 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 YBX3P16989 372 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL4A1-201ENST00000375820 KRT6CP48668 564 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 ADGRA1Q86SQ6 560 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 SPATA6LQ8N4H0 392 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 ENKURQ8TC29 256 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 GTF3C2Q8WUA4 911 aaPredicted RBP13.97□□□□□ -0.17
COL4A1-201ENST00000375820 HDAC7Q8WUI4 952 aa13.97□□□□□ -0.17
COL4A1-201ENST00000375820 TMEM191CA6NGB0 347 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 MRASO14807 208 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 BANF1O75531 89 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 ACAP1Q15027 740 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 KBTBD2Q8IY47 623 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 ZNF671Q8TAW3 534 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 OXNAD1Q96HP4 312 aaPredicted RBP13.96□□□□□ -0.17
COL4A1-201ENST00000375820 TKTL2Q9H0I9 626 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 CNGB3Q9NQW8 809 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 DNPEPQ9ULA0 475 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 H3BRB1 525 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 FCHO1O14526 889 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 CLOCKO15516 846 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 COX7A2P14406 83 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 ERCC2P18074 760 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 MYL12AP19105 171 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 BEX3Q00994 111 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 ZIK1Q3SY52 487 aaPredicted RBP13.96□□□□□ -0.17
COL4A1-201ENST00000375820 SCIMPQ6UWF3 145 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 RGL4Q8IZJ4 473 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 DEFB106AQ8N104 65 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 HTR3CQ8WXA8 447 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 ELMO1Q92556 727 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 TUT1Q9H6E5 874 aaKnown RBP13.96□□□□□ -0.17
COL4A1-201ENST00000375820 C17orf75Q9HAS0 396 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 RRAGCQ9HB90 399 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 INVSQ9Y283 1065 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 PCDHB5Q9Y5E4 795 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 ZNF839A8K0R7 811 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 SLC26A4O43511 780 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 FBXO21O94952 628 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 PABPC1P11940 636 aaKnown RBP13.96□□□□□ -0.17
COL4A1-201ENST00000375820 HIRAP54198 1017 aaPredicted RBP13.96□□□□□ -0.17
COL4A1-201ENST00000375820 RAD23AP54725 363 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 TROAPQ12815 778 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 LLGL2Q6P1M3 1020 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 PROSER1Q86XN7 944 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 MCOLN2Q8IZK6 566 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 RXFP1Q9HBX9 757 aa13.96□□□□□ -0.17
COL4A1-201ENST00000375820 RBAK-RBAKDNI3L0D1 243 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 RBBP4Q09028 425 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 BTG3Q14201 252 aaPredicted RBP13.96□□□□□ -0.18
COL4A1-201ENST00000375820 GRTP1Q5TC63 336 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 TTI2Q6NXR4 508 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 CCNJLQ8IV13 435 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 MYOCQ99972 504 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 DCLRE1BQ9H816 532 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 SOHLH2Q9NX45 425 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 DSEQ9UL01 958 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 GLI2P10070 1586 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 FFAR3O14843 346 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 GPR42O15529 346 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 IFNA16P05015 189 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 EPORP19235 508 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 PTPAQ15257 358 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 SETMARQ53H47 684 aaPredicted RBP13.96□□□□□ -0.18
COL4A1-201ENST00000375820 BHLHE22Q8NFJ8 381 aaPredicted RBP13.96□□□□□ -0.18
COL4A1-201ENST00000375820 EXO5Q9H790 373 aa13.96□□□□□ -0.18
COL4A1-201ENST00000375820 TM9SF1O15321 606 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 PECAM1P16284 738 aaPredicted RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 TSNQ15631 228 aaKnown RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 CBWD6Q4V339 395 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 IRAK1BP1Q5VVH5 260 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 CDH24Q86UP0 819 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 ITFG1Q8TB96 612 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 ACTRT1Q8TDG2 376 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 MRPL48Q96GC5 212 aaKnown RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 SLC4A5Q9BY07 1137 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 PRRG3Q9BZD7 231 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 GALNT8Q9NY28 637 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 KLF15Q9UIH9 416 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 MRPS7Q9Y2R9 242 aaKnown RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 PDHXO00330 501 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 TPP1O14773 563 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 IDH3BO43837 385 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 SREBF1P36956 1147 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 MAPKAPK2P49137 400 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 MRPS22P82650 360 aaKnown RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 EPS8Q12929 822 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 PGM5Q15124 567 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 CCNG2Q16589 344 aa13.95□□□□□ -0.18
COL4A1-201ENST00000375820 PPP1R26Q5T8A7 1209 aaPredicted RBP13.95□□□□□ -0.18
COL4A1-201ENST00000375820 ZC3H7AQ8IWR0 971 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms