RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 NME3Q13232 169 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 TP53INP2Q8IXH6 220 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 TNS4Q8IZW8 715 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 ATXN7L3BQ96GX2 97 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 TNIP3Q96KP6 325 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 PGLYRP2Q96PD5 576 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 LRRC40Q9H9A6 602 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 ZSWIM8A7E2V4 1837 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 SMIM28A0A1B0GU29 152 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.9□□□□□ -0.02
MSH5-201ENST00000375703 RBM47A0AV96 593 aaKnown RBP14.9□□□□□ -0.02
MSH5-201ENST00000375703 EEF2KO00418 725 aaKnown RBP14.9□□□□□ -0.02
MSH5-201ENST00000375703 MAP3K13O43283 966 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 CCNT2O60583 730 aaKnown RBP14.9□□□□□ -0.02
MSH5-201ENST00000375703 UBTFL6P0CB48 400 aaPredicted RBP14.9□□□□□ -0.02
MSH5-201ENST00000375703 ALOX15P16050 662 aaPredicted RBP14.9□□□□□ -0.02
MSH5-201ENST00000375703 TKTP29401 623 aaKnown RBP14.9□□□□□ -0.02
MSH5-201ENST00000375703 CDK7P50613 346 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 PAFAH1B3Q15102 231 aaKnown RBP14.9□□□□□ -0.02
MSH5-201ENST00000375703 STRA8Q7Z7C7 330 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 PYDC1Q8WXC3 89 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 GDAP2Q9NXN4 497 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 KLHL8Q9P2G9 620 aaPredicted RBP14.9□□□□□ -0.02
MSH5-201ENST00000375703 USP12O75317 370 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 DAB1O75553 588 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 FESP07332 822 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 NDUFV1P49821 464 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 GTF2A2P52657 109 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 DEUP1Q05D60 604 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 PLD6Q8N2A8 252 aaKnown RBP14.9□□□□□ -0.02
MSH5-201ENST00000375703 SPDYE1Q8NFV5 336 aaPredicted RBP14.9□□□□□ -0.02
MSH5-201ENST00000375703 SLC26A7Q8TE54 656 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 ZNF560Q96MR9 790 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 NPY6RQ99463 290 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 OSMRQ99650 979 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 RBBP8Q99708 897 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 DUSP16Q9BY84 665 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 CYP4F11Q9HBI6 524 aa14.9□□□□□ -0.02
MSH5-201ENST00000375703 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.9□□□□□ -0.02
MSH5-201ENST00000375703 PLXNA1Q9UIW2 1896 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 HUS1O60921 280 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 GPR32O75388 356 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 USP4Q13107 963 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 CFAP157Q5JU67 520 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 THEMIS2Q5TEJ8 643 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 OTUD1Q5VV17 481 aaPredicted RBP14.89□□□□□ -0.03
MSH5-201ENST00000375703 SYPL2Q5VXT5 272 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 FSTL4Q6MZW2 842 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 PGM2L1Q6PCE3 622 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 ADGRG6Q86SQ4 1221 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 DNAAF3Q8N9W5 541 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 PHC3Q8NDX5 983 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 ACTRT2Q8TDY3 377 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 NT5C3BQ969T7 300 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 ZNF669Q96BR6 464 aaPredicted RBP14.89□□□□□ -0.03
MSH5-201ENST00000375703 DDX50Q9BQ39 737 aaKnown RBP14.89□□□□□ -0.03
MSH5-201ENST00000375703 BFARQ9NZS9 450 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 ADAM28Q9UKQ2 775 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 STAP1Q9ULZ2 295 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 MYO18AQ92614 2054 aaKnown RBP14.89□□□□□ -0.03
MSH5-201ENST00000375703 SF3B1O75533 1304 aaKnown RBP eCLIP14.89□□□□□ -0.031e-8■■■■■ 28.9
MSH5-201ENST00000375703 CLDN5O00501 218 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 BUD23O43709 281 aaKnown RBP14.89□□□□□ -0.03
MSH5-201ENST00000375703 AHCYL1O43865 530 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 PDE5AO76074 875 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 SORBS2O94875 1100 aaKnown RBP14.89□□□□□ -0.03
MSH5-201ENST00000375703 HSPA4LO95757 839 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 LYNP07948 512 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 TAF6P49848 677 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 SERPINB8P50452 374 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 ASPHQ12797 758 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 CDC16Q13042 620 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.89□□□□□ -0.03
MSH5-201ENST00000375703 B3GALNT2Q8NCR0 500 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 AZIN2Q96A70 460 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 AGAP2Q99490 1192 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 COG4Q9H9E3 785 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 GOLGA2P5Q9HBQ8 144 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 LRRC4Q9HBW1 653 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 PDP2Q9P2J9 529 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 CDH22Q9UJ99 828 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 PCDHB12Q9Y5F1 795 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 CDY2AQ9Y6F7 541 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 CDY1Q9Y6F8 540 aa14.89□□□□□ -0.03
MSH5-201ENST00000375703 DCXO43602 365 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 BEST1O76090 585 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 ZCCHC18P0CG32 403 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 PNPLA4P41247 253 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 DPYSQ14117 519 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 RAPH1Q70E73 1250 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 DEFB107AQ8IZN7 70 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 PHTF2Q8N3S3 785 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 GPRC5AQ8NFJ5 357 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 OR6Y1Q8NGX8 325 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 WNT8BQ93098 351 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 PPP2R3CQ969Q6 453 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 IFT43Q96FT9 208 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 HNRNPABQ99729 332 aaKnown RBP14.88□□□□□ -0.03
MSH5-201ENST00000375703 PIDD1Q9HB75 910 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 MAN1C1Q9NR34 630 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms