RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 MED7O43513 233 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 GABBR2O75899 941 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 EPHX1P07099 455 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 GRK6P43250 576 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 GPD2P43304 727 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 CSNK1EP49674 416 aaKnown RBP12.63□□□□□ -0.39
LSM2-208ENST00000375661 CCT8P50990 548 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 BCAT1P54687 386 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 ZBTB16Q05516 673 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 CYP4F3Q08477 520 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 BST2Q10589 180 aaKnown RBP12.63□□□□□ -0.39
LSM2-208ENST00000375661 CAMK2BQ13554 666 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 SMAD1Q15797 465 aaKnown RBP12.63□□□□□ -0.39
LSM2-208ENST00000375661 MEA1Q16626 185 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 PTPRNQ16849 979 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 INAVAQ3KP66 663 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 SPECC1LQ69YQ0 1117 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 IRF2BP2Q7Z5L9 587 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 PIGZQ86VD9 579 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 WDTC1Q8N5D0 677 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 WFIKKN2Q8TEU8 576 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 SLC35F5Q8WV83 523 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 CPLX3Q8WVH0 158 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 PLD4Q96BZ4 506 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 LRIG1Q96JA1 1093 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 CIPCQ9C0C6 399 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 LHX5Q9H2C1 402 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 HESX1Q9UBX0 185 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 RASAL2Q9UJF2 1139 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 CAPN11Q9UMQ6 739 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 PCDHGC3Q9UN70 934 aa12.63□□□□□ -0.39
LSM2-208ENST00000375661 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.63□□□□□ -0.39
LSM2-208ENST00000375661 GOLGA4Q13439 2230 aaKnown RBP12.63□□□□□ -0.39
LSM2-208ENST00000375661 LAMA5O15230 3695 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 PLXNA2O75051 1894 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 XPO1O14980 1071 aaKnown RBP12.62□□□□□ -0.39
LSM2-208ENST00000375661 SETSIPP0DME0 302 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 CHRNB2P17787 502 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 CASP14P31944 242 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 EFEMP1Q12805 493 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 KIF19Q2TAC6 998 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 RAB41Q5JT25 222 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 TAF3Q5VWG9 929 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 PMF1Q6P1K2 205 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 DDI1Q8WTU0 396 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 SLC20A1Q8WUM9 679 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 IQCDQ96DY2 449 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 MRFAP1L1Q96HT8 127 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 BBC3Q96PG8 261 aaPredicted RBP12.62□□□□□ -0.39
LSM2-208ENST00000375661 BTBD1Q9H0C5 482 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 TMEM245Q9H330 911 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 AIPL1Q9NZN9 384 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 MARCH2Q9P0N8 246 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 CYTH4Q9UIA0 394 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 NOCTQ9UK39 431 aaKnown RBP12.62□□□□□ -0.39
LSM2-208ENST00000375661 PLA2G4CQ9UP65 541 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 BTBD3Q9Y2F9 522 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 ANKRD6Q9Y2G4 727 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.62□□□□□ -0.39
LSM2-208ENST00000375661 SNX11Q9Y5W9 270 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 IGSF10Q6WRI0 2623 aa12.62□□□□□ -0.39
LSM2-208ENST00000375661 TSPAN3O60637 253 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 SEMA4FO95754 770 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 HMBSP08397 361 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 MMEP08473 750 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 CDK4P11802 303 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 FERP16591 822 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 CD27P26842 260 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 ACSL1P33121 698 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 RPL34P49207 117 aaKnown RBP12.61□□□□□ -0.39
LSM2-208ENST00000375661 RGS7P49802 495 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 ZBED6P86452 979 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 FMO1Q01740 532 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 TBX2Q13207 712 aaPredicted RBP12.61□□□□□ -0.39
LSM2-208ENST00000375661 MPPE1Q53F39 396 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 SFMBT2Q5VUG0 894 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 TMEM215Q68D42 235 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 RSRC2Q7L4I2 434 aaKnown RBP12.61□□□□□ -0.39
LSM2-208ENST00000375661 TMC6Q7Z403 805 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 FAM124AQ86V42 546 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 TMPRSS12Q86WS5 348 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 DENND1CQ8IV53 801 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 PASD1Q8IV76 773 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 KCTD13Q8WZ19 329 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 SNX19Q92543 992 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 GOLGA1Q92805 767 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 UBL7Q96S82 380 aaPredicted RBP12.61□□□□□ -0.39
LSM2-208ENST00000375661 SYT11Q9BT88 431 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 IRX2Q9BZI1 471 aaPredicted RBP12.61□□□□□ -0.39
LSM2-208ENST00000375661 C6orf106Q9H6K1 298 aaPredicted RBP12.61□□□□□ -0.39
LSM2-208ENST00000375661 SGK2Q9HBY8 427 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 TM9SF3Q9HD45 589 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 OLA1Q9NTK5 396 aaKnown RBP12.61□□□□□ -0.39
LSM2-208ENST00000375661 CLEC4EQ9ULY5 219 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 LUC7L2Q9Y383 392 aaKnown RBP12.61□□□□□ -0.39
LSM2-208ENST00000375661 PCDHGA1Q9Y5H4 931 aa12.61□□□□□ -0.39
LSM2-208ENST00000375661 NYNRINQ9P2P1 1898 aaKnown RBP12.61□□□□□ -0.39
LSM2-208ENST00000375661 SLC12A8A0AV02 714 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 TK2O00142 265 aa12.6□□□□□ -0.39
LSM2-208ENST00000375661 LATS1O95835 1130 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms