RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 CARD8Q9Y2G2 431 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 UBE2QL1A1L167 161 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 E9PBE3 544 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 KPNA5O15131 536 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 NKX1-1Q15270 411 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-204ENST00000375290 CCDC149Q6ZUS6 474 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 TMEM121Q9BTD3 319 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 AP4E1Q9UPM8 1137 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 ATG7O95352 703 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 NME5P56597 212 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 BTKQ06187 659 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 PSTKQ8IV42 348 aaKnown RBP10.39□□□□□ -0.75
PTCH1-204ENST00000375290 TLCD1Q96CP7 247 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 RGS20O76081 388 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 EMC10Q5UCC4 262 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 BHLHB9Q6PI77 547 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 DNERQ8NFT8 737 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 SH3KBP1Q96B97 665 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 SGF29Q96ES7 293 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 CHID1Q9BWS9 393 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 AP4B1Q9Y6B7 739 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 KIDINS220Q9ULH0 1771 aa10.39□□□□□ -0.75
PTCH1-204ENST00000375290 FAM20BO75063 409 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 MFN2O95140 757 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PAICSP22234 425 aaKnown RBP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 CCNG1P51959 295 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PIGWQ7Z7B1 504 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 ITPKCQ96DU7 683 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 ZHX1-C8orf76Q96EF9 292 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 IFT172Q9UG01 1749 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 AP1G2O75843 785 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 FAM153BP0C7A2 387 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 MAPK8P45983 427 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 VAC14Q08AM6 782 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 FAM153CQ494X1 144 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 LIPMQ5VYY2 423 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 NKAPQ8N5F7 415 aaKnown RBP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 WDCPQ9H6R7 721 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 COX4I1P13073 169 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 IL5RAQ01344 420 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PRKCEQ02156 737 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 SLC44A2Q8IWA5 706 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 STAG3L4Q8TBR4 150 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 SLITRK1Q96PX8 696 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PANX3Q96QZ0 392 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 REEP1Q9H902 201 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 BARX2Q9UMQ3 279 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 LBPP18428 481 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 ATP5F1P24539 256 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PTPN7P35236 360 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 SAMD4AQ9UPU9 718 aaKnown RBP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 ADAMTS13Q76LX8 1427 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 A0A096LPK6 155 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 F8W810 466 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 HAT1O14929 419 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PGM3O95394 542 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 C7P10643 843 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 CCNB1P14635 433 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 ADRA1DP25100 572 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PRKG1Q13976 671 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 HYIQ5T013 277 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 CLDN25C9JDP6 229 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 ADORA2BP29275 332 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 LRPAP1P30533 357 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 SYCE2Q6PIF2 218 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PM20D2Q8IYS1 436 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 CDK20Q8IZL9 346 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 SVOPLQ8N434 492 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 TSEN2Q8NCE0 465 aaKnown RBP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 TBC1D16Q8TBP0 767 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 RBM4BQ9BQ04 359 aaKnown RBP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 RBM4Q9BWF3 364 aaKnown RBP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PRR12Q9ULL5 1215 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PEX16Q9Y5Y5 336 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 LOC110117498-PIK3R3F6TDL0 507 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 FSCN2O14926 492 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 ZBTB39O15060 712 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 GUCY1B2O75343 617 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 ODC1P11926 461 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 AKR1B1P15121 316 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 GNL1P36915 607 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 HPCAL1P37235 193 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 ITGADQ13349 1161 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PGAM4Q8N0Y7 254 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 AHI1Q8N157 1196 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PIK3R3Q92569 461 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 ERGIC3Q9Y282 383 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 CYP3A7-CYP3A51PA0A087WV96 503 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 GSC2O15499 205 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 ALDH1A1P00352 501 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 CYP3A7P24462 503 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PSMB9P28065 219 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 IFI35P80217 286 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 FOLH1Q04609 750 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 QPRTQ15274 297 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 AGKQ53H12 422 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 STXBP5Q5T5C0 1151 aa10.38□□□□□ -0.75
PTCH1-204ENST00000375290 PHF13Q86YI8 300 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-204ENST00000375290 BHLHE22Q8NFJ8 381 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms