RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 DNAJB4Q9UDY4 337 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 SH3GLB1Q9Y371 365 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 PCDHB2Q9Y5E7 798 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 RBAK-RBAKDNI3L0D1 243 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 PDLIM1O00151 329 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 TNFRSF10AO00220 468 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 FFAR2O15552 330 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 ARAFP10398 606 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 LONRF2Q1L5Z9 754 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 SUSD1Q6UWL2 747 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 TMC5Q6UXY8 1006 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 AFG1LQ8WV93 481 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 TRAPPC12Q8WVT3 735 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 CCDC127Q96BQ5 260 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 PPP1R10Q96QC0 940 aaKnown RBP9.27□□□□□ -0.93
UBR4-201ENST00000375218 SH3GL2Q99962 352 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 STRA6Q9BX79 667 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 NT5C1AQ9BXI3 368 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 MS4A5Q9H3V2 200 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 COQ10BQ9H8M1 238 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 INTS13Q9NVM9 706 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 XKRY2A2RUG3 117 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 PSMD11O00231 422 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 SYN3O14994 580 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 PGRMC2O15173 223 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 PRKAB2O43741 272 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 SSX5O60225 188 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 POLR2EP19388 210 aaKnown RBP9.27□□□□□ -0.93
UBR4-201ENST00000375218 ERVK-21P61565 698 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 CHAF1BQ13112 559 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 ATAT1Q5SQI0 421 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 MPP7Q5T2T1 576 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 PRR5LQ6MZQ0 368 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 METTL2BQ6P1Q9 378 aaKnown RBP9.27□□□□□ -0.93
UBR4-201ENST00000375218 GJD3Q8N144 294 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 FAM84BQ96KN1 310 aaPredicted RBP9.27□□□□□ -0.93
UBR4-201ENST00000375218 TREX2Q9BQ50 279 aaPredicted RBP9.27□□□□□ -0.93
UBR4-201ENST00000375218 CD244Q9BZW8 370 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 ZSCAN32Q9NX65 697 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 IL19Q9UHD0 177 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 MYH4Q9Y623 1939 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 PER2O15055 1255 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 HMBSP08397 361 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 HSPD1P10809 573 aaKnown RBP9.27□□□□□ -0.93
UBR4-201ENST00000375218 GBP1P32455 592 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 UBE2HP62256 183 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 TRAPPC3LQ5T215 181 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 ARMC6Q6NXE6 501 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 HTR3DQ70Z44 454 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 RABEPKQ7Z6M1 372 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 TSPYL5Q86VY4 417 aaPredicted RBP9.27□□□□□ -0.93
UBR4-201ENST00000375218 CLVS1Q8IUQ0 354 aaPredicted RBP9.27□□□□□ -0.93
UBR4-201ENST00000375218 PPFIBP2Q8ND30 876 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 FBXO18Q8NFZ0 1043 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 CLHC1Q8NHS4 586 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 DIO2Q92813 273 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 FAM111AQ96PZ2 611 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 NFKBIZQ9BYH8 718 aa9.27□□□□□ -0.93
UBR4-201ENST00000375218 LOC285556D6RIA3 1793 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 PSMA7O14818 248 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 RARBP10826 455 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 ENPEPQ07075 957 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 TOR1AIP1Q5JTV8 583 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 IZUMO3Q5VZ72 239 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 MRPL10Q7Z7H8 261 aaKnown RBP9.26□□□□□ -0.93
UBR4-201ENST00000375218 KIRREL3Q8IZU9 778 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 TEX47Q8TBZ9 253 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 RFKQ969G6 155 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 PMEPA1Q969W9 287 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 CYFIP2Q96F07 1278 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 GPR61Q9BZJ8 451 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 RNF32Q9H0A6 362 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 TCF7L1Q9HCS4 588 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 MID1IP1Q9NPA3 183 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 CACNG4Q9UBN1 327 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 CHD7Q9P2D1 2997 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 HEATR9A2RTY3 570 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 NOTOA8MTQ0 251 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 LMNAP02545 664 aaKnown RBP9.26□□□□□ -0.93
UBR4-201ENST00000375218 ASLP04424 464 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 COL6A2P12110 1019 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 OSMP13725 252 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 WNT5AP41221 380 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 CCR4P51679 360 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 PRRX1P54821 245 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 KLF1Q13351 362 aaPredicted RBP9.26□□□□□ -0.93
UBR4-201ENST00000375218 GNASQ5JWF2 1037 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 Q5PR19 223 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 NDUFAF5Q5TEU4 345 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 NEPROQ6NW34 567 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 FAM124AQ86V42 546 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 TTLQ8NG68 377 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 SPATA20Q8TB22 786 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 PDCD6IPQ8WUM4 868 aaKnown RBP9.26□□□□□ -0.93
UBR4-201ENST00000375218 LMBR1Q8WVP7 490 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 SLC5A11Q8WWX8 675 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 ZNF653Q96CK0 615 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 SMPD3Q9NY59 655 aaPredicted RBP9.26□□□□□ -0.93
UBR4-201ENST00000375218 RNF103-CHMP3A0A140T963 221 aa9.26□□□□□ -0.93
UBR4-201ENST00000375218 GCOM1H8Y6P7 765 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms