RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 PRDM16Q9HAZ2 1276 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 TPRKBQ9Y3C4 175 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 BRCA2P51587 3418 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 C15orf38-AP3S2A0A0A6YYH1 394 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 FAM25AB3EWG3 89 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 FAM25CB3EWG5 89 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 FAM25GB3EWG6 89 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 PEX10O60683 326 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 TNFAIP8O95379 198 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 ITGAVP06756 1048 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 APRTP07741 180 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 RBP1P09455 135 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 PDGFRAP16234 1089 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 PTPN4P29074 926 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 SOAT1P35610 550 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 SHHQ15465 462 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 EOGTQ5NDL2 527 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 FAM46CQ5VWP2 391 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 PLEKHA7Q6IQ23 1121 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 ARPINQ7Z6K5 226 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 SLC35G2Q8TBE7 412 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 ENKURQ8TC29 256 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 MYOCQ99972 504 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 C7orf25Q9BPX7 421 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 HSPBP1Q9NZL4 362 aa6.43□□□□□ -1.38
PTPN3-202ENST00000374541 SALL3Q9BXA9 1300 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 TREHO43280 583 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 DYRK3O43781 588 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 ZNF862O60290 1169 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 FGF18O76093 207 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 JMJD7P0C870 316 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 MUTP22033 750 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 SARSP49591 514 aaKnown RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 ACOT2P49753 483 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 MARSP56192 900 aaKnown RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 SRSF11Q05519 484 aaKnown RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 IRF5Q13568 498 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 WDR93Q6P2C0 686 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 FBXL19Q6PCT2 694 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 LBX2Q6XYB7 198 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 MB21D2Q8IYB1 491 aaPredicted RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 NAT16Q8N8M0 369 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 AGR3Q8TD06 166 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 SLITRK2Q9H156 845 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 SFXN1Q9H9B4 322 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 SLC24A2Q9UI40 661 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 LRCH1Q9Y2L9 728 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 UMODL1Q5DID0 1318 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 LRRC72A6NJI9 287 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 FAM220BPB1ANY3 271 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 KATNA1O75449 491 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 PRLRP16471 622 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 PAX3P23760 479 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 PPP3CCP48454 512 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 GALCP54803 685 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 BTKQ06187 659 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 TGM3Q08188 693 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 CDC73Q6P1J9 531 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 POTEGQ6S5H5 508 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 ADGRF2Q8IZF7 708 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 ADSSL1Q8N142 457 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 WDR24Q96S15 920 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 NELL2Q99435 816 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 PABPC3Q9H361 631 aaKnown RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 NEK6Q9HC98 313 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 KLHL28Q9NXS3 571 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 DAPK2Q9UIK4 370 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 FAM47E-STBD1D6RA91 191 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 TSPAN3O60637 253 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 RHOBTB3O94955 611 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 RB1P06400 928 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 ATP6V1B1P15313 513 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 TOP3AQ13472 1001 aaPredicted RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 TRIM25Q14258 630 aaKnown RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 ZNF618Q5T7W0 954 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 PMF1Q6P1K2 205 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 B3GALNT2Q8NCR0 500 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 ZNF333Q96JL9 665 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 TRIM51Q9BSJ1 452 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 STRADBQ9C0K7 418 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 OSBPL2Q9H1P3 480 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 COMMD8Q9NX08 183 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 TUBA8Q9NY65 449 aaPredicted RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 VTI1BQ9UEU0 232 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 SUSD2Q9UGT4 822 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 DRG1Q9Y295 367 aaKnown RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 ARIH1Q9Y4X5 557 aaPredicted RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 SIPA1L3O60292 1781 aaPredicted RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 SHANK3Q9BYB0 1731 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 CPED1A4D0V7 1026 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 LARGE1O95461 756 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 IL1BP01584 269 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 EIF4BP23588 611 aaKnown RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 YWHAQP27348 245 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 TOB2Q14106 344 aaPredicted RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 RABL6Q3YEC7 729 aaPredicted RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 FAXCQ5TGI0 409 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 SNX30Q5VWJ9 437 aa6.42□□□□□ -1.38
PTPN3-202ENST00000374541 ZCCHC8Q6NZY4 707 aaKnown RBP6.42□□□□□ -1.38
PTPN3-202ENST00000374541 C15orf52Q6ZUT6 534 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms