RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 VANGL2Q9ULK5 521 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 MAD1L1Q9Y6D9 718 aa17.33■□□□□ 0.37
PTPN20-203ENST00000374342 TCRBV9S1A1TA0A576 114 aa17.33■□□□□ 0.36
PTPN20-203ENST00000374342 SLC12A8A0AV02 714 aa17.33■□□□□ 0.36
PTPN20-203ENST00000374342 SPAG6O75602 509 aa17.33■□□□□ 0.36
PTPN20-203ENST00000374342 NRG1Q02297 640 aaPredicted RBP17.33■□□□□ 0.36
PTPN20-203ENST00000374342 ARTNQ5T4W7 220 aa17.33■□□□□ 0.36
PTPN20-203ENST00000374342 ARHGAP36Q6ZRI8 547 aa17.33■□□□□ 0.36
PTPN20-203ENST00000374342 TADA2BQ86TJ2 420 aa17.33■□□□□ 0.36
PTPN20-203ENST00000374342 ARHGAP12Q8IWW6 846 aa17.33■□□□□ 0.36
PTPN20-203ENST00000374342 CMTR2Q8IYT2 770 aaKnown RBP17.33■□□□□ 0.36
PTPN20-203ENST00000374342 MPP5Q8N3R9 675 aa17.33■□□□□ 0.36
PTPN20-203ENST00000374342 TMEM199Q8N511 208 aa17.33■□□□□ 0.36
PTPN20-203ENST00000374342 ATP6V0D2Q8N8Y2 350 aa17.33■□□□□ 0.36
PTPN20-203ENST00000374342 TTLL2Q9BWV7 592 aa17.33■□□□□ 0.36
PTPN20-203ENST00000374342 RASA4BC9J798 803 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 RASA4O43374 803 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 TLR5O60602 858 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 EFCAB14O75071 495 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 SEC24AO95486 1093 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 URODP06132 367 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 TUFMP49411 452 aaKnown RBP17.32■□□□□ 0.36
PTPN20-203ENST00000374342 CDK16Q00536 496 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 DSG1Q02413 1049 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 CBLBQ13191 982 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 RTL3Q8N8U3 475 aaKnown RBP17.32■□□□□ 0.36
PTPN20-203ENST00000374342 MAML1Q92585 1016 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 LRRC39Q96DD0 335 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 AGAP3Q96P47 875 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 YME1L1Q96TA2 773 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 GBA3Q9H227 469 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 PPANQ9NQ55 473 aaKnown RBP17.32■□□□□ 0.36
PTPN20-203ENST00000374342 PIH1D1Q9NWS0 290 aaKnown RBP17.32■□□□□ 0.36
PTPN20-203ENST00000374342 SPG21Q9NZD8 308 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 AFF4Q9UHB7 1163 aaKnown RBP17.32■□□□□ 0.36
PTPN20-203ENST00000374342 TTLL3Q9Y4R7 772 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 ALPK3Q96L96 1907 aa17.32■□□□□ 0.36
PTPN20-203ENST00000374342 TMEM120BA0PK00 339 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 ZBTB24O43167 697 aaPredicted RBP17.31■□□□□ 0.36
PTPN20-203ENST00000374342 ZDHHC11BP0C7U3 371 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 BRAFP15056 766 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 KRT15P19012 456 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 DNAJB2P25686 324 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 STX2P32856 288 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 LBX1P52954 281 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 PKN2Q16513 984 aaKnown RBP17.31■□□□□ 0.36
PTPN20-203ENST00000374342 MS4A13Q5J8X5 152 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 ITPRIPL1Q6GPH6 555 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 USP33Q8TEY7 942 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 AUTS2Q8WXX7 1259 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 C1orf74Q96LT6 269 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 CYTH2Q99418 400 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 GORASP1Q9BQQ3 440 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 UBE2OQ9C0C9 1292 aaKnown RBP17.31■□□□□ 0.36
PTPN20-203ENST00000374342 KCNK9Q9NPC2 374 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 NDFIP2Q9NV92 336 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 FETUBQ9UGM5 382 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 PLXNA4Q9HCM2 1894 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 NFKB1P19838 968 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 MLLT6P55198 1093 aaPredicted RBP17.31■□□□□ 0.36
PTPN20-203ENST00000374342 NR1H3Q13133 447 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 SPARCL1Q14515 664 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 ZSCAN26Q16670 478 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 RAP1GAP2Q684P5 730 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 OTOP2Q7RTS6 562 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 TFAP2DQ7Z6R9 452 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 TRABD2AQ86V40 505 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 LZTR1Q8N653 840 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 MGARPQ8TDB4 240 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 BCAS4Q8TDM0 211 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 BTN2A3PQ96KV6 586 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 SIGLEC10Q96LC7 697 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 ZNF512Q96ME7 567 aaPredicted RBP17.31■□□□□ 0.36
PTPN20-203ENST00000374342 TRIM56Q9BRZ2 755 aaKnown RBP17.31■□□□□ 0.36
PTPN20-203ENST00000374342 SLC39A8Q9C0K1 460 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 EPN3Q9H201 632 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 CYP4F11Q9HBI6 524 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 INTS9Q9NV88 658 aaKnown RBP17.31■□□□□ 0.36
PTPN20-203ENST00000374342 YIPF1Q9Y548 306 aa17.31■□□□□ 0.36
PTPN20-203ENST00000374342 OBSL1O75147 1896 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 ANAPC1Q9H1A4 1944 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 ZBBXA8MT70 800 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 JCHAINP01591 159 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 MLNP12872 115 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 CD68P34810 354 aaPredicted RBP17.3■□□□□ 0.36
PTPN20-203ENST00000374342 MSH2P43246 934 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 SEC24CP53992 1094 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 SESN2P58004 480 aaPredicted RBP17.3■□□□□ 0.36
PTPN20-203ENST00000374342 KBTBD12Q3ZCT8 623 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 LRRC8BQ6P9F7 803 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 UNC5AQ6ZN44 842 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 ANKRD42Q8N9B4 389 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 ZNF461Q8TAF7 563 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 ATXN2LQ8WWM7 1075 aaKnown RBP17.3■□□□□ 0.36
PTPN20-203ENST00000374342 VAT1Q99536 393 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 EBNA1BP2Q99848 306 aaKnown RBP17.3■□□□□ 0.36
PTPN20-203ENST00000374342 DHRS4Q9BTZ2 278 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 TMEM106CQ9BVX2 250 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 TRHDEQ9UKU6 1024 aa17.3■□□□□ 0.36
PTPN20-203ENST00000374342 ARHGAP42A6NI28 874 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms