RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 NOP2P46087 812 aaKnown RBP18.9■□□□□ 0.62
PBX3-205ENST00000373492 NRG1Q02297 640 aaPredicted RBP18.9■□□□□ 0.62
PBX3-205ENST00000373492 DMC1Q14565 340 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 HADHQ16836 314 aaKnown RBP18.9■□□□□ 0.62
PBX3-205ENST00000373492 C5orf22Q49AR2 442 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 RNF43Q68DV7 783 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 ANKS1BQ7Z6G8 1248 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 C14orf80Q86SX3 495 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 KIAA1328Q86T90 577 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 ALYREFQ86V81 257 aaKnown RBP18.9■□□□□ 0.62
PBX3-205ENST00000373492 LONP2Q86WA8 852 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 SFTPA1Q8IWL2 248 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 LRRC8AQ8IWT6 810 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 CCAR2Q8N163 923 aaKnown RBP18.9■□□□□ 0.62
PBX3-205ENST00000373492 FIBINQ8TAL6 211 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 IGSF8Q969P0 613 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 PPARGC1AQ9UBK2 798 aaKnown RBP18.9■□□□□ 0.62
PBX3-205ENST00000373492 CLEC4EQ9ULY5 219 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 MMP17Q9ULZ9 603 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 AP4E1Q9UPM8 1137 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 SNX10Q9Y5X0 201 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 FANCMQ8IYD8 2048 aa18.9■□□□□ 0.62
PBX3-205ENST00000373492 A0A0A6YYK5 440 aaPredicted RBP18.89■□□□□ 0.61
PBX3-205ENST00000373492 TRIM24O15164 1050 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 ARHGAP6O43182 974 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 CLDN11O75508 207 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 MTA2O94776 668 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 CHRM1P11229 460 aaPredicted RBP18.89■□□□□ 0.61
PBX3-205ENST00000373492 CNR2P34972 360 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 SSR1P43307 286 aaKnown RBP18.89■□□□□ 0.61
PBX3-205ENST00000373492 CDH4P55283 916 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 OXCT1P55809 520 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 MESDQ14696 234 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 TCEAL1Q15170 157 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 E2F5Q15329 346 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 CHST9Q7L1S5 443 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 TRMT11Q7Z4G4 463 aaKnown RBP18.89■□□□□ 0.61
PBX3-205ENST00000373492 PSTKQ8IV42 348 aaKnown RBP18.89■□□□□ 0.61
PBX3-205ENST00000373492 ARFGAP1Q8N6T3 406 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 IL17RCQ8NAC3 791 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 ACRBPQ8NEB7 543 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 WFIKKN2Q8TEU8 576 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 UCMAQ8WVF2 138 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 ZYG11BQ9C0D3 744 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 CKAP5Q14008 2032 aa18.89■□□□□ 0.61
PBX3-205ENST00000373492 IGLV3-10A0A075B6K4 115 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.88■□□□□ 0.61
PBX3-205ENST00000373492 PRR23AA6NEV1 266 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 DRGXA6NNA5 263 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 TMEM110-MUSTN1A8MSY1 372 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 MOCS3O95396 460 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 KLF8O95600 359 aaPredicted RBP18.88■□□□□ 0.61
PBX3-205ENST00000373492 LMNAP02545 664 aaKnown RBP18.88■□□□□ 0.61
PBX3-205ENST00000373492 HLA-FP30511 346 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 L1CAMP32004 1257 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 MAN1A1P33908 653 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 TIE1P35590 1138 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 FNTBP49356 437 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 VAV2P52735 878 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 DMWDQ09019 674 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 ZNF177Q13360 481 aaPredicted RBP18.88■□□□□ 0.61
PBX3-205ENST00000373492 BOLA3Q53S33 107 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 EOGTQ5NDL2 527 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 EMC10Q5UCC4 262 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 DAB2IPQ5VWQ8 1189 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 WDR5BQ86VZ2 330 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 CIR1Q86X95 450 aaPredicted RBP18.88■□□□□ 0.61
PBX3-205ENST00000373492 ZNF683Q8IZ20 524 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 AHI1Q8N157 1196 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 ALLCQ8N6M5 410 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 TBC1D31Q96DN5 1066 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 PPP1R9BQ96SB3 815 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 EPAS1Q99814 870 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 SNRNP25Q9BV90 132 aaKnown RBP18.88■□□□□ 0.61
PBX3-205ENST00000373492 DHX35Q9H5Z1 703 aaKnown RBP18.88■□□□□ 0.61
PBX3-205ENST00000373492 RETREG1Q9H6L5 497 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 ABCB8Q9NUT2 735 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 KIAA1522Q9P206 1035 aaPredicted RBP18.88■□□□□ 0.61
PBX3-205ENST00000373492 GGA2Q9UJY4 613 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 ZFHX2Q9C0A1 2572 aaPredicted RBP18.88■□□□□ 0.61
PBX3-205ENST00000373492 VPS13AQ96RL7 3174 aa18.88■□□□□ 0.61
PBX3-205ENST00000373492 MUC22E2RYF6 1773 aaPredicted RBP18.87■□□□□ 0.61
PBX3-205ENST00000373492 CREB3O43889 395 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 GFRA3O60609 400 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 LRIG2O94898 1065 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 APBB3O95704 486 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 PTMAP06454 111 aaKnown RBP18.87■□□□□ 0.61
PBX3-205ENST00000373492 PABPC1P11940 636 aaKnown RBP18.87■□□□□ 0.61
PBX3-205ENST00000373492 DGKEP52429 567 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 HADHBP55084 474 aaKnown RBP18.87■□□□□ 0.61
PBX3-205ENST00000373492 SLC12A1Q13621 1099 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 EIF4HQ15056 248 aaKnown RBP18.87■□□□□ 0.61
PBX3-205ENST00000373492 CRY1Q16526 586 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 GEN1Q17RS7 908 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 RWDD4Q6NW29 188 aaKnown RBP18.87■□□□□ 0.61
PBX3-205ENST00000373492 PYROXD2Q8N2H3 581 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 CCDC33Q8N5R6 958 aa18.87■□□□□ 0.61
PBX3-205ENST00000373492 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.87■□□□□ 0.61
PBX3-205ENST00000373492 ZNF513Q8N8E2 541 aaPredicted RBP18.87■□□□□ 0.61
PBX3-205ENST00000373492 TXNDC5Q8NBS9 432 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms