RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 NXPE2Q96DL1 559 aa19.9■□□□□ 0.78
TRAPPC3-204ENST00000373166 HSFY1Q96LI6 401 aa19.9■□□□□ 0.78
TRAPPC3-204ENST00000373166 SIX2Q9NPC8 291 aa19.9■□□□□ 0.78
TRAPPC3-204ENST00000373166 SUN2Q9UH99 717 aa19.9■□□□□ 0.78
TRAPPC3-204ENST00000373166 GGA2Q9UJY4 613 aa19.9■□□□□ 0.78
TRAPPC3-204ENST00000373166 HBS1LQ9Y450 684 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-204ENST00000373166 PCDHGA1Q9Y5H4 931 aa19.9■□□□□ 0.78
TRAPPC3-204ENST00000373166 SETXQ7Z333 2677 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-204ENST00000373166 A0A1B0GTQ1 180 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 VILLO15195 856 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 CDK4P11802 303 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 PABPC1P11940 636 aaKnown RBP19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 JUPP14923 745 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 HNF1BP35680 557 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 DAOAP59103 153 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 C6orf118Q5T5N4 469 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 ADGRF1Q5T601 910 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 ZNF776Q68DI1 518 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 KIAA0895LQ68EN5 471 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 C11orf57Q6ZUT1 292 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 BHLHA9Q7RTU4 235 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 KIAA0907Q7Z7F0 614 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 PIP4K2CQ8TBX8 421 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 ADAM32Q8TC27 787 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 GANCQ8TET4 914 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 IRGQQ8WZA9 623 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 NDRG1Q92597 394 aaKnown RBP19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 TAB2Q9NYJ8 693 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 STOML2Q9UJZ1 356 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 DNAJC12Q9UKB3 198 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 SCML1Q9UN30 329 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 BPTFQ12830 3046 aa19.89■□□□□ 0.77
TRAPPC3-204ENST00000373166 YJEFN3A6XGL0 299 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 BECN2A8MW95 431 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 E7ENQ6 273 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 TK2O00142 265 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 PIK3R2O00459 728 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 FBXO21O94952 628 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 LATS1O95835 1130 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 POLR2EP19388 210 aaKnown RBP19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 MYL5Q02045 173 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 SFSWAPQ12872 951 aaKnown RBP19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 CDKAL1Q5VV42 579 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 BSPRYQ5W0U4 402 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 MBLAC2Q68D91 279 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 LRRC69Q6ZNQ3 347 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 USP30Q70CQ3 517 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 ZNF606Q8WXB4 792 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 ELF4Q99607 663 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 ORAI3Q9BRQ5 295 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 ST7Q9NRC1 585 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 ABCC13Q9NSE7 274 aa19.88■□□□□ 0.77
TRAPPC3-204ENST00000373166 FAM47DPA6NHR8 397 aa19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 ENC1O14682 589 aa19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 SART1O43290 800 aaKnown RBP19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 ZIC2O95409 532 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 LDOC1O95751 146 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 IGHV4-34P06331 123 aa19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 C1SP09871 688 aa19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 GPD2P43304 727 aa19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 ACADSBP45954 432 aa19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 DENND1BQ6P3S1 775 aa19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 ANKRD20A12PQ8NF67 263 aa19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 EDEM1Q92611 657 aa19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 TMEM63CQ9P1W3 806 aa19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 SFMBT1Q9UHJ3 866 aa19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 AJAP1Q9UKB5 411 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC3-204ENST00000373166 CKAP5Q14008 2032 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 A0A1W2PPC4 97 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 RRP8O43159 456 aaKnown RBP19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 RNASEH1O60930 286 aaKnown RBP19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 ITGAVP06756 1048 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 ABCB4P21439 1286 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 PTK2Q05397 1052 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 TYRO3Q06418 890 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 RAPGEF1Q13905 1077 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 KRT31Q15323 416 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 MPP7Q5T2T1 576 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 GATAD2AQ86YP4 633 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 ZNF557Q8N988 423 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 STK32AQ8WU08 396 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 SLC39A7Q92504 469 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 CNDP2Q96KP4 475 aaKnown RBP19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 SLC6A18Q96N87 628 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 MIS12Q9H081 205 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 RSPH9Q9H1X1 276 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 PABPC3Q9H361 631 aaKnown RBP19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 ACP6Q9NPH0 428 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 FANCLQ9NW38 375 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 FBXL12Q9NXK8 326 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 AK5Q9Y6K8 562 aa19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 HELZ2Q9BYK8 2649 aaKnown RBP19.86■□□□□ 0.77
TRAPPC3-204ENST00000373166 RFPL3O75679 317 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 GABBR2O75899 941 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 LTFP02788 710 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 PRB1P04280 392 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 ITPKBP27987 946 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 EIF2S3P41091 472 aaKnown RBP19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 GALCP54803 685 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms