RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 TRAPPC9Q96Q05 1148 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 SPATS2LQ9NUQ6 558 aaKnown RBP13.06□□□□□ -0.32
CTPS1-202ENST00000372621 CDH22Q9UJ99 828 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 PCDHB12Q9Y5F1 795 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.06□□□□□ -0.32
CTPS1-202ENST00000372621 GPR32O75388 356 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 BAG2O95816 211 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 HOXD8P13378 290 aaPredicted RBP13.06□□□□□ -0.32
CTPS1-202ENST00000372621 MX2P20592 715 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 ITGA9Q13797 1035 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 THEMIS2Q5TEJ8 643 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 BSPRYQ5W0U4 402 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 EPGNQ6UW88 154 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 TMEM135Q86UB9 458 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 PIGZQ86VD9 579 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 DCLK2Q8N568 766 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 MCMBPQ9BTE3 642 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 NXF3Q9H4D5 531 aaKnown RBP13.06□□□□□ -0.32
CTPS1-202ENST00000372621 CDHR5Q9HBB8 845 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 PDP2Q9P2J9 529 aa13.06□□□□□ -0.32
CTPS1-202ENST00000372621 UBQLN1Q9UMX0 589 aaKnown RBP13.06□□□□□ -0.32
CTPS1-202ENST00000372621 ZCWPW2A0A1B0GU75 182 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 G3V2L1 256 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 RECQL4O94761 1208 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 ITGAXP20702 1163 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 LIMK2P53671 638 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 ADIGQ0VDE8 80 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 NAPRTQ6XQN6 538 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 DHDDSQ86SQ9 333 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 PDSS2Q86YH6 399 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 PHTF2Q8N3S3 785 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 OR52K1Q8NGK4 314 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 CMTM5Q96DZ9 223 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 OXCT2Q9BYC2 517 aaPredicted RBP13.05□□□□□ -0.32
CTPS1-202ENST00000372621 ARHGAP42A6NI28 874 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 PRDX6P30041 224 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 GARSP41250 739 aaKnown RBP13.05□□□□□ -0.32
CTPS1-202ENST00000372621 NUMBP49757 651 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 SMAD1Q15797 465 aaKnown RBP13.05□□□□□ -0.32
CTPS1-202ENST00000372621 DCAF6Q58WW2 860 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 FSTL4Q6MZW2 842 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 FRMD7Q6ZUT3 714 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 SULF1Q8IWU6 871 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 CCNYQ8ND76 341 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 PYDC1Q8WXC3 89 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 SEPT10Q9P0V9 454 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 KIF3CO14782 793 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 NOS2P35228 1153 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 SERPINB8P50452 374 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 IFRD2Q12894 506 aaPredicted RBP13.05□□□□□ -0.32
CTPS1-202ENST00000372621 TNS4Q8IZW8 715 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 SLC7A14Q8TBB6 771 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 DCPSQ96C86 337 aaKnown RBP13.05□□□□□ -0.32
CTPS1-202ENST00000372621 SLC2A13Q96QE2 648 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 FERMT1Q9BQL6 677 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 PPP1R12CQ9BZL4 782 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 SNX25Q9H3E2 840 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 LRRC40Q9H9A6 602 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 COG4Q9H9E3 785 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 TXNDC16Q9P2K2 825 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 ADAMTS6Q9UKP5 1117 aa13.05□□□□□ -0.32
CTPS1-202ENST00000372621 SMIM28A0A1B0GU29 152 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 ZBTB14O43829 449 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 BEST1O76090 585 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 AP2A1O95782 977 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 UBTFL6P0CB48 400 aaPredicted RBP13.04□□□□□ -0.32
CTPS1-202ENST00000372621 GNAT1P11488 350 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 AKAP5P24588 427 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 PTPN3P26045 913 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 CSRP3P50461 194 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 TMEM62Q0P6H9 643 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 SYPL2Q5VXT5 272 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 KCTD11Q693B1 232 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 NOTUMQ6P988 496 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 FASTKD5Q7L8L6 764 aaKnown RBP13.04□□□□□ -0.32
CTPS1-202ENST00000372621 CATSPER4Q7RTX7 472 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 ZNF781Q8N8C0 355 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 RNF169Q8NCN4 708 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 JADE3Q92613 823 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 PPP2R3CQ969Q6 453 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 AGAP2Q99490 1192 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 HNRNPABQ99729 332 aaKnown RBP13.04□□□□□ -0.32
CTPS1-202ENST00000372621 DUSP16Q9BY84 665 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 CDH19Q9H159 772 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 PAPOLBQ9NRJ5 636 aaKnown RBP13.04□□□□□ -0.32
CTPS1-202ENST00000372621 PIGVQ9NUD9 493 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 POMPQ9Y244 141 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 E2F8A0AVK6 867 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 CREB3O43889 395 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 CD4P01730 458 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 SPRP35270 261 aaPredicted RBP13.04□□□□□ -0.32
CTPS1-202ENST00000372621 PAPOLAP51003 745 aaKnown RBP13.04□□□□□ -0.32
CTPS1-202ENST00000372621 USP4Q13107 963 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 SEMA3BQ13214 749 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 XKR4Q5GH76 650 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 SLC30A9Q6PML9 568 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 PAQR9Q6ZVX9 377 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 PID1Q7Z2X4 250 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 STRA8Q7Z7C7 330 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 GALNT15Q8N3T1 639 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms