RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 B3GNT5Q9BYG0 378 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 IMPG2Q9BZV3 1241 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 SDCBP2Q9H190 292 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 GPAMQ9HCL2 828 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 FAM49BQ9NUQ9 324 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 ZDHHC7Q9NXF8 308 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 USP18Q9UMW8 372 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 SSX2IPQ9Y2D8 614 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 TLL2Q9Y6L7 1015 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 SCINQ9Y6U3 715 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 CNTNAP4Q9C0A0 1308 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 MYO18AQ92614 2054 aaKnown RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 XIRP1Q702N8 1843 aaKnown RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 SYNJ2BP-COX16A0A087WUM0 186 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 TRIM43BA6NCK2 446 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 PDLIM1O00151 329 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 APOEP02649 317 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 MT-ND1P03886 318 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 KRT81Q14533 505 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF460Q14592 562 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 AOC3Q16853 763 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 ANO4Q32M45 955 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 CRY2Q49AN0 593 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 DCAF6Q58WW2 860 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 TREML2Q5T2D2 321 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 FAM102AQ5T9C2 384 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-204ENST00000372246 ANGEL2Q5VTE6 544 aaKnown RBP5.55□□□□□ -1.52
ATG4A-204ENST00000372246 C15orf52Q6ZUT6 534 aaKnown RBP5.55□□□□□ -1.52
ATG4A-204ENST00000372246 IQCF2Q8IXL9 164 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 TRIML2Q8N7C3 387 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 C12orf29Q8N999 325 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 GABPB2Q8TAK5 448 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-204ENST00000372246 MIPOL1Q8TD10 442 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 SYTL5Q8TDW5 730 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-204ENST00000372246 GIPC3Q8TF64 312 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 NDRG1Q92597 394 aaKnown RBP5.55□□□□□ -1.52
ATG4A-204ENST00000372246 SGF29Q96ES7 293 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 LRGUKQ96M69 825 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 RIT2Q99578 217 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 CCT7Q99832 543 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 COQ10BQ9H8M1 238 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 NGRNQ9NPE2 291 aaKnown RBP5.55□□□□□ -1.52
ATG4A-204ENST00000372246 TRPV5Q9NQA5 729 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 XPNPEP3Q9NQH7 507 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 THAP1Q9NVV9 213 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 KCND2Q9NZV8 630 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 COX16Q9P0S2 106 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 RIMS3Q9UJD0 308 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 FAF1Q9UNN5 650 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-204ENST00000372246 B4GALT5O43286 388 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 ATP9BO43861 1147 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 EXTL3O43909 919 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 PLIN3O60664 434 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 VDRP11473 427 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 NCAM1P13591 858 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 TSPAN8P19075 237 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 IL4RP24394 825 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 MGAT1P26572 445 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 GNL1P36915 607 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-204ENST00000372246 RABGGTBP53611 331 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 MTTPP55157 894 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 PRKCEQ02156 737 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 DCTN2Q13561 401 aaKnown RBP5.55□□□□□ -1.52
ATG4A-204ENST00000372246 CARTPTQ16568 116 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 LPCAT2Q7L5N7 544 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF554Q86TJ5 538 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 CLVS1Q8IUQ0 354 aaPredicted RBP5.55□□□□□ -1.52
ATG4A-204ENST00000372246 RTKN2Q8IZC4 609 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 OFCC1Q8IZS5 231 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 DSELQ8IZU8 1212 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 PLD5Q8N7P1 536 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.55□□□□□ -1.52
ATG4A-204ENST00000372246 CLEC4CQ8WTT0 213 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 KBTBD7Q8WVZ9 684 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 TRIM11Q96F44 468 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 CPB2Q96IY4 423 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 SIGLEC10Q96LC7 697 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 RMDN3Q96TC7 470 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 LGMNQ99538 433 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 APBA2Q99767 749 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 OMDQ99983 421 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 FOXP3Q9BZS1 431 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 COA1Q9GZY4 146 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 CXCL16Q9H2A7 254 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 PCDH12Q9NPG4 1184 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 SELENONQ9NZV5 590 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 SEPT10Q9P0V9 454 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 ARHGAP28Q9P2N2 729 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 EPS15L1Q9UBC2 864 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 ARHGAP26Q9UNA1 814 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 SNX13Q9Y5W8 968 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 SIPA1L1O43166 1804 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 NFASCO94856 1347 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 CROCCQ5TZA2 2017 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 COL24A1Q17RW2 1714 aa5.55□□□□□ -1.52
ATG4A-204ENST00000372246 SMIM31A0A1B0GVY4 71 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 SAC3D1A6NKF1 404 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 APOC4-APOC2K7ER74 178 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 KLF11O14901 512 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 B4GAT1O43505 415 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms