RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 KRT5P13647 590 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 TBXAS1P24557 533 aaPredicted RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 ZNF132P52740 706 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 LILRA4P59901 499 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 DSC1Q08554 894 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 TUSC3Q13454 348 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 SOWAHAQ2M3V2 549 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 BROXQ5VW32 411 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 C1orf228Q6PIY5 440 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 TMEM270Q6UE05 265 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 GLB1LQ6UWU2 654 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 FAM43BQ6ZT52 329 aaPredicted RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 ENOSF1Q7L5Y1 443 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 CHST15Q7LFX5 561 aaPredicted RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 MTERF4Q7Z6M4 381 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 TMCO2Q7Z6W1 182 aaPredicted RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 DDX53Q86TM3 631 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 MTDHQ86UE4 582 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 OSTM1Q86WC4 334 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 DNAAF5Q86Y56 855 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 PALB2Q86YC2 1186 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 REXO1L1PQ8IX06 675 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 PAF1Q8N7H5 531 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 ACRBPQ8NEB7 543 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 SLC30A5Q8TAD4 765 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 LNX1Q8TBB1 728 aaPredicted RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 DIO2Q92813 273 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 BADQ92934 168 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 JAKMIP2Q96AA8 810 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 TRMT2BQ96GJ1 504 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 ABHD8Q96I13 439 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 TWNKQ96RR1 684 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 AGPAT1Q99943 283 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 MRPL45Q9BRJ2 306 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 ELOVL4Q9GZR5 314 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 IL23AQ9NPF7 189 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 CISHQ9NSE2 258 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 SLC38A7Q9NVC3 462 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 TBC1D13Q9NVG8 400 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 ZNHIT6Q9NWK9 470 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 B4GALT6Q9UBX8 382 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 HMGXB4Q9UGU5 601 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 NENFQ9UMX5 172 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 TFR2Q9UP52 801 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 PPP2R2CQ9Y2T4 447 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 PCDHB7Q9Y5E2 793 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 PCDHB4Q9Y5E5 795 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 PCDHGB3Q9Y5G1 929 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 MICAL3Q7RTP6 2002 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 TDRD15B5MCY1 1934 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 ABHD14A-ACY1A0A1B0GW23 586 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 FAM170AA1A519 330 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 TBKBP1A7MCY6 615 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 EIF3CLB5ME19 914 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 I3L4J1 428 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 AQP7O14520 342 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 XPOTO43592 962 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 LCA5LO95447 670 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 IL33O95760 270 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 EFEMP2O95967 443 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 ITGB1P05556 798 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 LCP1P13796 627 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 CYP11B1P15538 503 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 SYN1P17600 705 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 SDHBP21912 280 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 RPL9P32969 192 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 GPR3P46089 330 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 BRCC3P46736 316 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 TAF6P49848 677 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 KIF11P52732 1056 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 RAD23BP54727 409 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 PCBP3P57721 371 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 DEFB103AP81534 67 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 FMO1Q01740 532 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 GFPT1Q06210 699 aaPredicted RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 ADCY1Q08828 1119 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 MYO1EQ12965 1108 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 GRIK3Q13003 919 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 LLGL1Q15334 1064 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 UPP1Q16831 310 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 TMEM177Q53S58 311 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 TDRD12Q587J7 1177 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 TAF3Q5VWG9 929 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 ZC3H7AQ8IWR0 971 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 COLGALT2Q8IYK4 626 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 CCDC170Q8IYT3 715 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 CCAR2Q8N163 923 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 TMEM199Q8N511 208 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 OXR1Q8N573 874 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 ZNF655Q8N720 491 aaPredicted RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 SLC4A11Q8NBS3 891 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 FRS2Q8WU20 508 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 KBTBD7Q8WVZ9 684 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 TFAP2BQ92481 460 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 SENP8Q96LD8 212 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 FAM81BQ96LP2 452 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 CCDC42Q96M95 316 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 MMS19Q96T76 1030 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 EIF3CQ99613 913 aaKnown RBP3.75□□□□□ -1.81
MCF2-202ENST00000370573 IMPG2Q9BZV3 1241 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms