RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 DEFB128Q7Z7B8 93 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 EXOC3L1Q86VI1 746 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 KCNMB4Q86W47 210 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 RASAL3Q86YV0 1011 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CD101Q93033 1021 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 LENG1Q96BZ8 264 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 FAM161BQ96MY7 647 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 SRPK1Q96SB4 655 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 TBL1YQ9BQ87 522 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 APOL2Q9BQE5 337 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 GPR63Q9BZJ6 419 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 XYLT2Q9H1B5 865 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 SARS2Q9NP81 518 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 DPP7Q9UHL4 492 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ADAM28Q9UKQ2 775 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ANKRD6Q9Y2G4 727 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 L3MBTL1Q9Y468 752 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 PCDHA11Q9Y5I1 949 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 PTPRJQ12913 1337 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 DLEC1Q9Y238 1755 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 SYN3O14994 580 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 NOL3O60936 208 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 STBD1O95210 358 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CKMP06732 381 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ELNP15502 786 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 NQO1P15559 274 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 PROZP22891 400 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 PSMB4P28070 264 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 GRK4P32298 578 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ATP5C1P36542 298 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 BRCC3P46736 316 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CLCNKBP51801 687 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ALDH18A1P54886 795 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 AP2B1P63010 937 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CREMQ03060 361 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 FAAP100Q0VG06 881 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 BTG3Q14201 252 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 HIC1Q14526 733 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 EFTUD2Q15029 972 aaKnown RBP eCLIP5.44□□□□□ -1.545e-8■■■■■ 46.5
SMNDC1-202ENST00000369603 CCL14Q16627 93 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 RNASEH2BQ5TBB1 312 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 RETSATQ6NUM9 610 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 FAM43BQ6ZT52 329 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC35B2Q8TB61 432 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 BLOC1S5Q8TDH9 187 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ULK4Q96C45 1275 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CAPNS2Q96L46 248 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 QKIQ96PU8 341 aaKnown RBP eCLIP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 VCX3AQ9NNX9 186 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ZDHHC18Q9NUE0 388 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 TMEM39AQ9NV64 488 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 NDFIP2Q9NV92 336 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 MARCOQ9UEW3 520 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ATP11BQ9Y2G3 1177 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 C5orf60A6NFR6 353 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 KIF3CO14782 793 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 UBOX5O94941 541 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 CSH1P0DML2 217 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 CSH2P0DML3 217 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 RALBP11234 206 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 CRABP2P29373 138 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 CD151P48509 253 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 GJA9P57773 515 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 ST8SIA6P61647 398 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 BMPR2Q13873 1038 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 DPYSL2Q16555 572 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 USP41Q3LFD5 358 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 PCID2Q5JVF3 399 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 PPP1R15BQ5SWA1 713 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 TEDDM1Q5T9Z0 273 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 TMCO4Q5TGY1 634 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 TRABD2AQ86V40 505 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 FAM228AQ86W67 206 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 TDRPQ86YL5 185 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 CPT1BQ92523 772 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 SDCCAG3Q96C92 435 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 DCUN1D1Q96GG9 259 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 EGFL8Q99944 293 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 LBHD1Q9BQE6 289 aaPredicted RBP5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 CEP41Q9BYV8 373 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 ZYG11BQ9C0D3 744 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 LRRC4CQ9HCJ2 640 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 PTPRHQ9HD43 1115 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 HEY2Q9UBP5 337 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 FETUBQ9UGM5 382 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 SEPT3Q9UH03 358 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 BAG5Q9UL15 447 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 CDYLQ9Y232 598 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 COL4A1P02462 1669 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 CFAP99D6REC4 459 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 GCATO75600 419 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 GLP2RO95838 553 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 SERPINE1P05121 402 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 ENO1P06733 434 aaKnown RBP5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 CCNB1P14635 433 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 RAG1P15918 1043 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 L1CAMP32004 1257 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 GABRB2P47870 512 aa5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 SH3BGRP55822 239 aaPredicted RBP5.43□□□□□ -1.54
SMNDC1-202ENST00000369603 PRKCZQ05513 592 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms