RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 VAPBO95292 243 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 AMHP03971 560 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 S100A1P23297 94 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 RBL1P28749 1068 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 ZNF394Q53GI3 561 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 MTX3Q5HYI7 312 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 PPM1JQ5JR12 505 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 GPR107Q5VW38 600 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 ANKRD26P1Q6NSI1 321 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 TTC33Q6PID6 262 aaPredicted RBP16.55■□□□□ 0.24
CHD1L-203ENST00000369259 ZNF786Q8N393 782 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 EMC1Q8N766 993 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 TNIP2Q8NFZ5 429 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 TRUB1Q8WWH5 349 aaKnown RBP16.55■□□□□ 0.24
CHD1L-203ENST00000369259 STARD8Q92502 1023 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 TFAP2CQ92754 450 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 PGBD4Q96DM1 585 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 CIB1Q99828 191 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 CDCA7Q9BWT1 371 aaPredicted RBP16.55■□□□□ 0.24
CHD1L-203ENST00000369259 ATAD3AQ9NVI7 634 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 DUS2Q9NX74 493 aaKnown RBP16.55■□□□□ 0.24
CHD1L-203ENST00000369259 NCKIPSDQ9NZQ3 722 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 CROTQ9UKG9 612 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 USP18Q9UMW8 372 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 SNX13Q9Y5W8 968 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 TRIM64BA6NI03 449 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 TMEM114B3SHH9 223 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 CFAP99D6REC4 459 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 J3QRK9 145 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 LSM1O15116 133 aaKnown RBP16.54■□□□□ 0.24
CHD1L-203ENST00000369259 TADA2AO75478 443 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 RPS6KA4O75676 772 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 ADSLP30566 484 aaPredicted RBP16.54■□□□□ 0.24
CHD1L-203ENST00000369259 LIG4P49917 911 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 CDH6P55285 790 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 PRAMEP78395 509 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 PRKG1Q13976 671 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 CYP2A13Q16696 494 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 LSM12Q3MHD2 195 aaKnown RBP16.54■□□□□ 0.24
CHD1L-203ENST00000369259 PTPN20Q4JDL3 420 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 SLC9A4Q6AI14 798 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 TAS1R3Q7RTX0 852 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 UNC5BQ8IZJ1 945 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 AGR3Q8TD06 166 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 TANKQ92844 425 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 FBXL8Q96CD0 374 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 TDRD1Q9BXT4 1180 aaKnown RBP16.54■□□□□ 0.24
CHD1L-203ENST00000369259 SCHIP1Q9P0W5 487 aaPredicted RBP16.54■□□□□ 0.24
CHD1L-203ENST00000369259 PCDHGC3Q9UN70 934 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 B3GNT3Q9Y2A9 372 aa16.54■□□□□ 0.24
CHD1L-203ENST00000369259 ALDH1A2O94788 518 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 ENDOD1O94919 500 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 ERBB2P04626 1255 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 PSMC1P62191 440 aaKnown RBP16.53■□□□□ 0.24
CHD1L-203ENST00000369259 RHDQ02161 417 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 CD300CQ08708 224 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 NIPAL4Q0D2K0 466 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 PMS2P3Q13401 168 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 HHIPL2Q6UWX4 724 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 NAPRTQ6XQN6 538 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 ZBTB49Q6ZSB9 765 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.53■□□□□ 0.24
CHD1L-203ENST00000369259 TMA16Q96EY4 203 aaKnown RBP16.53■□□□□ 0.24
CHD1L-203ENST00000369259 CGREF1Q99674 301 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 IMPG2Q9BZV3 1241 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 TJP2Q9UDY2 1190 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 AGO2Q9UKV8 859 aaKnown RBP16.53■□□□□ 0.24
CHD1L-203ENST00000369259 SLC30A1Q9Y6M5 507 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 C9IYK1 514 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 NEMP1O14524 444 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 SNAP91O60641 907 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 TRIM25Q14258 630 aaKnown RBP16.53■□□□□ 0.24
CHD1L-203ENST00000369259 PTK2BQ14289 1009 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 CLPPQ16740 277 aaPredicted RBP16.53■□□□□ 0.24
CHD1L-203ENST00000369259 NEPROQ6NW34 567 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 NIPA1Q7RTP0 329 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 PTAR1Q7Z6K3 402 aaPredicted RBP16.53■□□□□ 0.24
CHD1L-203ENST00000369259 TFAP2BQ92481 460 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 CDKL2Q92772 493 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 OLFM1Q99784 485 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 C20orf96Q9NUD7 363 aaPredicted RBP16.53■□□□□ 0.24
CHD1L-203ENST00000369259 ZNF358Q9NW07 568 aa16.53■□□□□ 0.24
CHD1L-203ENST00000369259 TRIM64A6NGJ6 449 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 GNPATO15228 680 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 ITGBL1O95965 494 aaPredicted RBP16.52■□□□□ 0.24
CHD1L-203ENST00000369259 TYK2P29597 1187 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 CACNB3P54284 484 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 TKFCQ3LXA3 575 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 PPP4R4Q6NUP7 873 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 ZNF354CQ86Y25 554 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 HERC6Q8IVU3 1022 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 SLC15A4Q8N697 577 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 SLC4A11Q8NBS3 891 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 OR5B17Q8NGF7 314 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 UHRF1Q96T88 793 aaPredicted RBP16.52■□□□□ 0.24
CHD1L-203ENST00000369259 CGRRF1Q99675 332 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 ZNF385DQ9H6B1 395 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 TRPV5Q9NQA5 729 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 ADA2Q9NZK5 511 aa16.52■□□□□ 0.24
CHD1L-203ENST00000369259 SUCOQ9UBS9 1254 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms