RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 ALKQ9UM73 1620 aa10.29□□□□□ -0.76
SIM1-202ENST00000369208 AIM2O14862 343 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 ZBTB11O95625 1053 aaPredicted RBP10.28□□□□□ -0.76
SIM1-202ENST00000369208 CD97P48960 835 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 SH3BP5LQ7L8J4 393 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 GRAMD1CQ8IYS0 662 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 RSAD1Q9HA92 442 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 DBR1Q9UK59 544 aaKnown RBP10.28□□□□□ -0.76
SIM1-202ENST00000369208 MBD5Q9P267 1494 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 C2CD2LO14523 706 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 LONRF1Q17RB8 773 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 MZT2AQ6P582 158 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 CASKIN2Q8WXE0 1202 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 FBXO32Q969P5 355 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 TMEM143Q96AN5 459 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 HPDLQ96IR7 371 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 ABI2Q9NYB9 513 aaPredicted RBP10.28□□□□□ -0.76
SIM1-202ENST00000369208 PRR12Q9ULL5 1215 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 PCDHGA11Q9Y5H2 935 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 LINC00854A0A1B0GVQ3 168 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 ZNF185O15231 689 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 CLOCKO15516 846 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 TMC7Q7Z402 723 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 RASAL3Q86YV0 1011 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 REM2Q8IYK8 340 aaPredicted RBP10.28□□□□□ -0.76
SIM1-202ENST00000369208 PHACTR4Q8IZ21 702 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 AIFM3Q96NN9 605 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 HEMGNQ9BXL5 484 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 RMND5AQ9H871 391 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 METTL21EPA6NDL7 271 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 FADS2P1A8MWK0 482 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 PSMD12O00232 456 aaPredicted RBP10.28□□□□□ -0.76
SIM1-202ENST00000369208 HPGDP15428 266 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 MAPK1P28482 360 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 ABATP80404 500 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 MYBPC3Q14896 1274 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 CDC42EP5Q6NZY7 148 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 ARPC5LQ9BPX5 153 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 CHCHD6Q9BRQ6 235 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 HERC2P3Q9BVR0 1158 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 HDHD2Q9H0R4 259 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 EPB41L1Q9H4G0 881 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 GDF3Q9NR23 364 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 VANGL2Q9ULK5 521 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 SNX7Q9UNH6 387 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 CLTCQ00610 1675 aaKnown RBP10.28□□□□□ -0.76
SIM1-202ENST00000369208 CCDC154A6NI56 674 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 ETV1P50549 477 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 NFIAQ12857 509 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 PDIA2Q13087 525 aaKnown RBP10.28□□□□□ -0.76
SIM1-202ENST00000369208 SNRNP35Q16560 246 aaKnown RBP10.28□□□□□ -0.76
SIM1-202ENST00000369208 STOX1Q6ZVD7 989 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 BTN2A2Q8WVV5 523 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 SENP2Q9HC62 589 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 RPN2P04844 631 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 SNRPAP09012 282 aaKnown RBP10.28□□□□□ -0.76
SIM1-202ENST00000369208 MSR1P21757 451 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 SULT2A1Q06520 285 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 MAPK7Q13164 816 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 CCDC81Q6ZN84 652 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 ZBED8Q8IZ13 594 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 DHRSXQ8N5I4 330 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 KBTBD7Q8WVZ9 684 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 PHF20Q9BVI0 1012 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 NIF3L1Q9GZT8 377 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 HMX1Q9NP08 348 aaPredicted RBP10.28□□□□□ -0.76
SIM1-202ENST00000369208 KLHL1Q9NR64 748 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 IFRD1O00458 451 aaPredicted RBP10.28□□□□□ -0.76
SIM1-202ENST00000369208 ATP9BO43861 1147 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 OR7A10O76100 309 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 ICAM1P05362 532 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 RENBPP51606 427 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 MARSP56192 900 aaKnown RBP10.28□□□□□ -0.76
SIM1-202ENST00000369208 ZNF844Q08AG5 666 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 PRKAA1Q13131 559 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 SGCGQ13326 291 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 NFYCQ13952 458 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 TBC1D10CQ8IV04 446 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 NKX2-3Q8TAU0 364 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 TEX47Q8TBZ9 253 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 SPIRE2Q8WWL2 714 aa10.28□□□□□ -0.76
SIM1-202ENST00000369208 RBM15Q96T37 977 aaKnown RBP eCLIP10.28□□□□□ -0.76
SIM1-202ENST00000369208 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.28□□□□□ -0.76
SIM1-202ENST00000369208 ALDH2P05091 517 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 NCAM1P13591 858 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 FOSL2P15408 326 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 ECT2LQ008S8 904 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 ANKDD1AQ495B1 522 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 C11orf88Q6PI97 169 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 AGPAT1Q99943 283 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 PRRG3Q9BZD7 231 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 TMEM9Q9P0T7 183 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 TUBE1Q9UJT0 475 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 SNX13Q9Y5W8 968 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 SPATA31E1Q6ZUB1 1445 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 DHFRP00374 187 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 NECTIN1Q15223 517 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 FRMD7Q6ZUT3 714 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 LHFPL3Q86UP9 236 aa10.27□□□□□ -0.76
SIM1-202ENST00000369208 SPARTQ8N0X7 666 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms