RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 BTBD6Q96KE9 485 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 CAPZA3Q96KX2 299 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 SLITRK1Q96PX8 696 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 ZNF670Q9BS34 389 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 TTLL2Q9BWV7 592 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 PARD6BQ9BYG5 372 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 CHRDQ9H2X0 955 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 RETREG1Q9H6L5 497 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 PARD6AQ9NPB6 346 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 PRMT8Q9NR22 394 aaPredicted RBP9.1□□□□□ -0.95
SNX27-201ENST00000368838 ABI2Q9NYB9 513 aaPredicted RBP9.1□□□□□ -0.95
SNX27-201ENST00000368838 CHORDC1Q9UHD1 332 aaPredicted RBP9.1□□□□□ -0.95
SNX27-201ENST00000368838 SCML2Q9UQR0 700 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 PCDHB5Q9Y5E4 795 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 PCDHGA2Q9Y5H1 932 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 ABCA7Q8IZY2 2146 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 CNOT1A5YKK6 2376 aaKnown RBP9.1□□□□□ -0.95
SNX27-201ENST00000368838 GOLGA8SH3BPF8 625 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 MAN2B1O00754 1011 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 PRPSAP2O60256 369 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 ERLIN1O75477 346 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 RTN3O95197 1032 aaPredicted RBP9.09□□□□□ -0.95
SNX27-201ENST00000368838 FYNP06241 537 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 ZDHHC11BP0C7U3 371 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 RARAP10276 462 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 HAPLN1P10915 354 aaPredicted RBP9.09□□□□□ -0.95
SNX27-201ENST00000368838 CHRNB1P11230 501 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 IL1R2P27930 398 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 MAGEA9P43362 315 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 TUFMP49411 452 aaKnown RBP9.09□□□□□ -0.95
SNX27-201ENST00000368838 RGS7P49802 495 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 RPL10AP62906 217 aaKnown RBP9.09□□□□□ -0.95
SNX27-201ENST00000368838 FOXK2Q01167 660 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 NRG1Q02297 640 aaPredicted RBP9.09□□□□□ -0.95
SNX27-201ENST00000368838 SPEM2Q0P670 501 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 ADIGQ0VDE8 80 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 TFDP2Q14188 446 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 PON2Q15165 354 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 TAF12Q16514 161 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 MAP9Q49MG5 647 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 SPDYCQ5MJ68 293 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 TEX35Q5T0J7 233 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 MSANTD2Q6P1R3 559 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 EMBQ6PCB8 327 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 CCNI2Q6ZMN8 369 aaPredicted RBP9.09□□□□□ -0.95
SNX27-201ENST00000368838 SPOCD1Q6ZMY3 1216 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 IFT20Q8IY31 132 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 NUP93Q8N1F7 819 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 LEMD2Q8NC56 503 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 SLC35B2Q8TB61 432 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 GRK7Q8WTQ7 553 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 NELL1Q92832 810 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 PIWIL1Q96J94 861 aaKnown RBP9.09□□□□□ -0.95
SNX27-201ENST00000368838 ZFRQ96KR1 1074 aaKnown RBP9.09□□□□□ -0.95
SNX27-201ENST00000368838 MYRFLQ96LU7 910 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 LRRC1Q9BTT6 524 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 RAB17Q9H0T7 212 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 EPC1Q9H2F5 836 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 TRPV4Q9HBA0 871 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 ABCC13Q9NSE7 274 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 TMEM30AQ9NV96 361 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 TMLHEQ9NVH6 421 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 POLR3BQ9NW08 1133 aaPredicted RBP9.09□□□□□ -0.95
SNX27-201ENST00000368838 FKBPLQ9UIM3 349 aa9.09□□□□□ -0.95
SNX27-201ENST00000368838 MAGED2Q9UNF1 606 aaPredicted RBP9.09□□□□□ -0.95
SNX27-201ENST00000368838 TPRP12270 2363 aaKnown RBP9.09□□□□□ -0.95
SNX27-201ENST00000368838 DCDC2BA2VCK2 349 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 SPECC1L-ADORA2AF8WAN1 911 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 APOC4-APOC2K7ER74 178 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 CLDN5O00501 218 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 APOC2P02655 101 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 LTFP02788 710 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 RALAP11233 206 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 TDGF1P13385 188 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 ZFXP17010 805 aaPredicted RBP9.08□□□□□ -0.96
SNX27-201ENST00000368838 BDNFP23560 247 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 RDXP35241 583 aaKnown RBP9.08□□□□□ -0.96
SNX27-201ENST00000368838 COILP38432 576 aaPredicted RBP9.08□□□□□ -0.96
SNX27-201ENST00000368838 PTGIRP43119 386 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 PPP3CCP48454 512 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 PXNP49023 591 aaPredicted RBP9.08□□□□□ -0.96
SNX27-201ENST00000368838 NR2C2P49116 596 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 CXCR3P49682 368 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 MAP3K7CLP57077 242 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 PUM1Q14671 1186 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNX27-201ENST00000368838 BRMS1LQ5PSV4 323 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 ERMARDQ5T6L9 678 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 DUPD1Q68J44 220 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 SLC9A4Q6AI14 798 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 TRIM68Q6AZZ1 485 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 KLHDC10Q6PID8 442 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 DEFB106AQ8N104 65 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 EMC1Q8N766 993 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 ATL2Q8NHH9 583 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 FAM172AQ8WUF8 416 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 PSMG2Q969U7 264 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 KCNK16Q96T55 309 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 PSMB7Q99436 277 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 ERP44Q9BS26 406 aa9.08□□□□□ -0.96
SNX27-201ENST00000368838 MED10Q9BTT4 135 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms