RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 CSKP41240 450 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 NUMBP49757 651 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 CCT8P50990 548 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 C21orf59P57076 290 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 CETN1Q12798 172 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 CDH18Q13634 790 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 FSCBQ5H9T9 825 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 KCNT1Q5JUK3 1230 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 DBX2Q6ZNG2 339 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 MMS22LQ6ZRQ5 1243 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 MARCH9Q86YJ5 346 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 ENGASEQ8NFI3 743 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 FIBINQ8TAL6 211 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 SPATA20Q8TB22 786 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 IGSF8Q969P0 613 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 AZIN2Q96A70 460 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 MYO19Q96H55 970 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 LMLNQ96KR4 655 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 HSFY1Q96LI6 401 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 CEP63Q96MT8 703 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 SLC6A18Q96N87 628 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 SERPINB11Q96P15 392 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 IRX2Q9BZI1 471 aaPredicted RBP10.72□□□□□ -0.69
CLRN3-201ENST00000368671 NUCKS1Q9H1E3 243 aaKnown RBP10.72□□□□□ -0.69
CLRN3-201ENST00000368671 RSPH9Q9H1X1 276 aaPredicted RBP10.72□□□□□ -0.69
CLRN3-201ENST00000368671 PABPC3Q9H361 631 aaKnown RBP10.72□□□□□ -0.69
CLRN3-201ENST00000368671 FBXL12Q9NXK8 326 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 HOOK1Q9UJC3 728 aaKnown RBP10.72□□□□□ -0.69
CLRN3-201ENST00000368671 MAN1B1Q9UKM7 699 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 INTS6Q9UL03 887 aaKnown RBP10.72□□□□□ -0.69
CLRN3-201ENST00000368671 CEP83Q9Y592 693 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 EPG5Q9HCE0 2579 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 A0A1W2PP55 124 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 TTC34A8MYJ7 566 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 RNF223E7ERA6 249 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 CAPN9O14815 690 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 MID1O15344 667 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 RNASEH1O60930 286 aaKnown RBP10.71□□□□□ -0.69
CLRN3-201ENST00000368671 RNASEH2AO75792 299 aaKnown RBP10.71□□□□□ -0.69
CLRN3-201ENST00000368671 LUC7L3O95232 432 aaKnown RBP10.71□□□□□ -0.69
CLRN3-201ENST00000368671 MOCS3O95396 460 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 FYNP06241 537 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 IGHV4-34P06331 123 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 KRT5P13647 590 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 CTSOP43234 321 aaPredicted RBP10.71□□□□□ -0.69
CLRN3-201ENST00000368671 CTSKP43235 329 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 GRK6P43250 576 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 CST6Q15828 149 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 HNRNPA1L2Q32P51 320 aaKnown RBP10.71□□□□□ -0.69
CLRN3-201ENST00000368671 MSS51Q4VC12 460 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 DCAF6Q58WW2 860 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 MS4A13Q5J8X5 152 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 PITRM1Q5JRX3 1037 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 RAP1GAP2Q684P5 730 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 DENND1BQ6P3S1 775 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 USP30Q70CQ3 517 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 TMPRSS7Q7RTY8 843 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 TAC4Q86UU9 113 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 CHSY1Q86X52 802 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 MMAAQ8IVH4 418 aaKnown RBP10.71□□□□□ -0.69
CLRN3-201ENST00000368671 LGI2Q8N0V4 545 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 LMO3Q8TAP4 145 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 TTC17Q96AE7 1141 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 DHTKD1Q96HY7 919 aaPredicted RBP10.71□□□□□ -0.69
CLRN3-201ENST00000368671 MRGPRX3Q96LB0 322 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 OMDQ99983 421 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 ORAI3Q9BRQ5 295 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 ACE2Q9BYF1 805 aaPredicted RBP10.71□□□□□ -0.69
CLRN3-201ENST00000368671 GTPBP4Q9BZE4 634 aaKnown RBP10.71□□□□□ -0.69
CLRN3-201ENST00000368671 SLC6A16Q9GZN6 736 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 NEUROG2Q9H2A3 272 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 SERGEFQ9UGK8 458 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 XPO7Q9UIA9 1087 aaKnown RBP10.71□□□□□ -0.69
CLRN3-201ENST00000368671 SCML1Q9UN30 329 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 CTNND2Q9UQB3 1225 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 ERVW-1Q9UQF0 538 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 TLR6Q9Y2C9 796 aa10.71□□□□□ -0.69
CLRN3-201ENST00000368671 GON4LQ3T8J9 2241 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 FRYQ5TBA9 3013 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 CHD8Q9HCK8 2581 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 A0A1W2PPC4 97 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 FAM149AA5PLN7 773 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 PMM2O15305 246 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 P4HA2O15460 535 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 TNFSF14O43557 240 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 APOEP02649 317 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 SRPRAP08240 638 aaKnown RBP10.7□□□□□ -0.7
CLRN3-201ENST00000368671 SLC8A1P32418 973 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 PPP1R2P41236 205 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 GPD2P43304 727 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 PSMD8P48556 350 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 GALCP54803 685 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 STX17P56962 302 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 NUCB2P80303 420 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 GCNT1Q02742 428 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 GUCA2AQ02747 115 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 KCNH2Q12809 1159 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 SFSWAPQ12872 951 aaKnown RBP10.7□□□□□ -0.7
CLRN3-201ENST00000368671 COL28A1Q2UY09 1125 aa10.7□□□□□ -0.7
CLRN3-201ENST00000368671 INAVAQ3KP66 663 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms