RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 SCML2Q9UQR0 700 aa17.92■□□□□ 0.46
LMNA-205ENST00000368299 PCDHB7Q9Y5E2 793 aa17.92■□□□□ 0.46
LMNA-205ENST00000368299 MGRN1O60291 552 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 EDF1O60869 148 aaKnown RBP17.91■□□□□ 0.46
LMNA-205ENST00000368299 PYGBP11216 843 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 HOXC13P31276 330 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 MAP2K2P36507 400 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 MAGEA11P43364 429 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 SESN2P58004 480 aaPredicted RBP17.91■□□□□ 0.46
LMNA-205ENST00000368299 CGB2Q6NT52 195 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 TRMT10BQ6PF06 316 aaKnown RBP17.91■□□□□ 0.46
LMNA-205ENST00000368299 FAM47EQ6ZV65 393 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 SCD5Q86SK9 330 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 NUP93Q8N1F7 819 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 ZNF75CPQ92670 426 aaPredicted RBP17.91■□□□□ 0.46
LMNA-205ENST00000368299 SERPINB11Q96P15 392 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 CATSPERBQ9H7T0 1116 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 MKS1Q9NXB0 559 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 DNAJB4Q9UDY4 337 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 PCDHB5Q9Y5E4 795 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 F5H423 210 aaPredicted RBP17.91■□□□□ 0.46
LMNA-205ENST00000368299 COPEO14579 308 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 CSH1P0DML2 217 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 CSH2P0DML3 217 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 MGAT1P26572 445 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 VARS2Q5ST30 1063 aaKnown RBP17.91■□□□□ 0.46
LMNA-205ENST00000368299 RNF43Q68DV7 783 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 RWDD4Q6NW29 188 aaKnown RBP17.91■□□□□ 0.46
LMNA-205ENST00000368299 CHSY1Q86X52 802 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 ARNTL2Q8WYA1 636 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 OXNAD1Q96HP4 312 aaPredicted RBP17.91■□□□□ 0.46
LMNA-205ENST00000368299 ADAM28Q9UKQ2 775 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 SNX10Q9Y5X0 201 aa17.91■□□□□ 0.46
LMNA-205ENST00000368299 ZNF638Q14966 1978 aaKnown RBP17.91■□□□□ 0.46
LMNA-205ENST00000368299 OR6C75A6NL08 312 aa17.9■□□□□ 0.46
LMNA-205ENST00000368299 AP3B1O00203 1094 aa17.9■□□□□ 0.46
LMNA-205ENST00000368299 ENPP3O14638 875 aa17.9■□□□□ 0.46
LMNA-205ENST00000368299 POLBP06746 335 aa17.9■□□□□ 0.46
LMNA-205ENST00000368299 DHRS4L1P0CG22 281 aa17.9■□□□□ 0.46
LMNA-205ENST00000368299 SRGAP2BP0DMP2 458 aa17.9■□□□□ 0.46
LMNA-205ENST00000368299 ETV4P43268 484 aa17.9■□□□□ 0.46
LMNA-205ENST00000368299 CDK7P50613 346 aa17.9■□□□□ 0.46
LMNA-205ENST00000368299 SF3A3Q12874 501 aaKnown RBP eCLIP17.9■□□□□ 0.46
LMNA-205ENST00000368299 ZNF280DQ6N043 979 aa17.9■□□□□ 0.46
LMNA-205ENST00000368299 MARK2Q7KZI7 788 aaKnown RBP17.9■□□□□ 0.46
LMNA-205ENST00000368299 CASP10Q92851 521 aa17.9■□□□□ 0.46
LMNA-205ENST00000368299 TSGA13Q96PP4 275 aa17.9■□□□□ 0.46
LMNA-205ENST00000368299 SIK2Q9H0K1 926 aa17.9■□□□□ 0.46
LMNA-205ENST00000368299 ZBTB24O43167 697 aaPredicted RBP17.89■□□□□ 0.46
LMNA-205ENST00000368299 PAGE1O75459 146 aa17.89■□□□□ 0.46
LMNA-205ENST00000368299 CCNFP41002 786 aa17.89■□□□□ 0.46
LMNA-205ENST00000368299 NRG1Q02297 640 aaPredicted RBP17.89■□□□□ 0.46
LMNA-205ENST00000368299 CRYMQ14894 314 aa17.89■□□□□ 0.46
LMNA-205ENST00000368299 CTXN3Q4LDR2 81 aa17.89■□□□□ 0.46
LMNA-205ENST00000368299 PLEKHG4Q58EX7 1191 aa17.89■□□□□ 0.46
LMNA-205ENST00000368299 TIFABQ6ZNK6 161 aa17.89■□□□□ 0.46
LMNA-205ENST00000368299 CCDC63Q8NA47 563 aa17.89■□□□□ 0.46
LMNA-205ENST00000368299 TBC1D31Q96DN5 1066 aa17.89■□□□□ 0.46
LMNA-205ENST00000368299 TEKT5Q96M29 485 aa17.89■□□□□ 0.46
LMNA-205ENST00000368299 BFARQ9NZS9 450 aa17.89■□□□□ 0.46
LMNA-205ENST00000368299 SLC17A7Q9P2U7 560 aa17.89■□□□□ 0.46
LMNA-205ENST00000368299 NEU3Q9UQ49 428 aa17.89■□□□□ 0.46
LMNA-205ENST00000368299 A0A1W2PQH9 124 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 NBNO60934 754 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 FKTNO75072 461 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 SLC2A3P11169 496 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 CCNCP24863 283 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 MRPL58Q14197 206 aaKnown RBP17.89■□□□□ 0.45
LMNA-205ENST00000368299 PRPSAP1Q14558 356 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 PREPLQ4J6C6 727 aaPredicted RBP17.89■□□□□ 0.45
LMNA-205ENST00000368299 SPANXN3Q5MJ09 141 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 MANEALQ5VSG8 457 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 KCTD11Q693B1 232 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 MSANTD2Q6P1R3 559 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 DBF4BQ8NFT6 615 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 SPOCK2Q92563 424 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 DPF3Q92784 378 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 FCRL2Q96LA5 508 aaPredicted RBP17.89■□□□□ 0.45
LMNA-205ENST00000368299 AGAP3Q96P47 875 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 SRPK1Q96SB4 655 aaKnown RBP17.89■□□□□ 0.45
LMNA-205ENST00000368299 TRIM56Q9BRZ2 755 aaKnown RBP17.89■□□□□ 0.45
LMNA-205ENST00000368299 SFMBT1Q9UHJ3 866 aa17.89■□□□□ 0.45
LMNA-205ENST00000368299 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.88■□□□□ 0.45
LMNA-205ENST00000368299 PITPNM1O00562 1244 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 PSMD3O43242 534 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 HOXA2O43364 376 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 RFPL1O75677 317 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 ELF3P78545 371 aaPredicted RBP17.88■□□□□ 0.45
LMNA-205ENST00000368299 NIPAL4Q0D2K0 466 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 ZBTB17Q13105 803 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 FAM126BQ8IXS8 530 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 ZNF276Q8N554 614 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 SEPT8Q92599 483 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 TACO1Q9BSH4 297 aaKnown RBP17.88■□□□□ 0.45
LMNA-205ENST00000368299 MANSC1Q9H8J5 431 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 LRRC40Q9H9A6 602 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 NMUR1Q9HB89 426 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 CASS4Q9NQ75 786 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 ABCF3Q9NUQ8 709 aa17.88■□□□□ 0.45
LMNA-205ENST00000368299 SYBUQ9NX95 663 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms