RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 LBPP18428 481 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 HALP42357 657 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 CASP4P49662 377 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 DPYSQ14117 519 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 GLRA4Q5JXX5 417 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 MCPH1Q8NEM0 835 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 NMRK2Q9NPI5 230 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 LOXHD1Q8IVV2 1947 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 A0A0G2JLW4 131 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 CHURC1-FNTBB4DL54 471 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 SLC16A3O15427 465 aaKnown RBP11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 CHRM3P20309 590 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 SERPINB9P50453 376 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 CACNB3P54284 484 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZNF544Q6NX49 715 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 MINDY2Q8NBR6 621 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 ARPC5LQ9BPX5 153 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 GPAMQ9HCL2 828 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 TOR4AQ9NXH8 423 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 DUSP12Q9UNI6 340 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZHX2Q9Y6X8 837 aa11.27□□□□□ -0.6
CDC42BPA-205ENST00000366769 PNMA8CA0A1B0GUJ8 204 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 FOXP2O15409 715 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 CCT8P50990 548 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 EIF3MQ7L2H7 374 aaKnown RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 BRSK2Q8IWQ3 736 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 MYO1HQ8N1T3 1032 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 SCFD2Q8WU76 684 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 NXNL1Q96CM4 212 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 CRLS1Q9UJA2 301 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 FADS3Q9Y5Q0 445 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 SCAMP1O15126 338 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 COX4I1P13073 169 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 HTR2BP41595 481 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 MARSP56192 900 aaKnown RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 ARF3P61204 181 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 ARF1P84077 181 aaKnown RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 AMPD2Q01433 879 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 CAMK2GQ13555 558 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 STK32CQ86UX6 486 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 PHACTR4Q8IZ21 702 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 OFCC1Q8IZS5 231 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 B3GALNT2Q8NCR0 500 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 FLAD1Q8NFF5 587 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 GRPEL2Q8TAA5 225 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 FAM136AQ96C01 138 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 NUAK2Q9H093 628 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 SENP2Q9HC62 589 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 NCF1BA6NI72 391 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 NCF1CA8MVU1 366 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 NCF1P14598 390 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 IL1R1P14778 569 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 STARP49675 285 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 SNRNP48Q6IEG0 339 aaKnown RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 GOLM1Q8NBJ4 401 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 AKAP1Q92667 903 aaKnown RBP eCLIP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 RBAKQ9NYW8 714 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 POLRMTO00411 1230 aaKnown RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 CTSHP09668 335 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 DSG3P32926 999 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 ZC2HC1CQ53FD0 456 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 FAM160B2Q86V87 743 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 TRPC4APQ8TEL6 797 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 SYT15Q9BQS2 421 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 BLOC1S4Q9NUP1 217 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 PRR12Q9ULL5 1215 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 PRKAR1AP10644 381 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 GRIA3P42263 894 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 ALDH9A1P49189 494 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 HIST2H2ACQ16777 129 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 HIST2H2AA3Q6FI13 130 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 SPACA7Q96KW9 195 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 ZFC3H1O60293 1989 aaKnown RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 ARHGEF5Q12774 1597 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 CLUP10909 449 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 MAGEA10P43363 369 aaPredicted RBP11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 TMEM26Q6ZUK4 368 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 FAM129BQ96TA1 746 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 SCUBE2Q9NQ36 999 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 KCNK4Q9NYG8 393 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 PFDN2Q9UHV9 154 aa11.27□□□□□ -0.61
CDC42BPA-205ENST00000366769 TSPAN19P0C672 248 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 RARBP10826 455 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 PTPN1P18031 435 aaKnown RBP11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 ME2P23368 584 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 FASP25445 335 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 DEFA5Q01523 94 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 DUOXA2Q1HG44 320 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 SWSAP1Q6NVH7 229 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 DNAJC14Q6Y2X3 702 aaPredicted RBP11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 SPACA6W5XKT8 324 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 HOXD10P28358 340 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 PRELPP51888 382 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 RAB25P57735 213 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 CDKAL1Q5VV42 579 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 FAM86B2P0C5J1 330 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 GSTT2P0CG29 244 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 GSTT2BP0CG30 244 aa11.26□□□□□ -0.61
CDC42BPA-205ENST00000366769 BNIP3Q12983 259 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms