RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 B4GALNT2Q8NHY0 566 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 FICDQ9BVA6 458 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 NT5MQ9NPB1 228 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 PCDHA11Q9Y5I1 949 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 UBIAD1Q9Y5Z9 338 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 XPO1O14980 1071 aaKnown RBP12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 ALDH1A2O94788 518 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 ASMTLO95671 621 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 TFE3P19532 575 aaPredicted RBP12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 RPL22P35268 128 aaKnown RBP12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 HPCAL1P37235 193 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 RIPK1Q13546 671 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 LUZP2Q86TE4 346 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 TMEM132CQ8N3T6 1108 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 MYLK2Q9H1R3 596 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 SSU72Q9NP77 194 aaKnown RBP12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 ITGA1P56199 1179 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 FUT2Q10981 343 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 VPS51Q9UID3 782 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 LZTS3O60299 673 aaPredicted RBP12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 URODP06132 367 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 RHOCP08134 193 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 ZNF544Q6NX49 715 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 OOSP2Q86WS3 158 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 ZKSCAN4Q969J2 545 aaPredicted RBP12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 VPS28Q9UK41 221 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 IPPQ9Y573 584 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 PCDHB5Q9Y5E4 795 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 SMIM31A0A1B0GVY4 71 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 MLYCDO95822 493 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 NPR3P17342 541 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 ZNF470Q6ECI4 717 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 TTC27Q6P3X3 843 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 ARHGEF19Q8IW93 802 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 CYP4Z2PQ8N1L4 340 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 SEPT8Q92599 483 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 TMEM216Q9P0N5 145 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 DYRK1BQ9Y463 629 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 WNT10BO00744 389 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 SNAP91O60641 907 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 SERPINH1P50454 418 aaKnown RBP12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 NR6A1Q15406 480 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 ILDR2Q71H61 639 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 FDXACB1Q9BRP7 624 aaPredicted RBP12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 TMEM79Q9BSE2 394 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 DHX33Q9H6R0 707 aaKnown RBP12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 CHORDC1Q9UHD1 332 aaPredicted RBP12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 NAV1Q8NEY1 1877 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 QSOX1O00391 747 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 TUFMP49411 452 aaKnown RBP12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 SMARCB1Q12824 385 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 PCID2Q5JVF3 399 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 FAXCQ5TGI0 409 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 SLC30A10Q6XR72 485 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 EXOC3L1Q86VI1 746 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 ADHFE1Q8IWW8 467 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 NKAPQ8N5F7 415 aaKnown RBP12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 CYP2W1Q8TAV3 490 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 ACTRT2Q8TDY3 377 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 RGS18Q9NS28 235 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 SNHG28P0DPA3 235 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 FBXW4P57775 412 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 CREMQ03060 361 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 ANKS6Q68DC2 871 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 SAMD7Q7Z3H4 446 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 ULK2Q8IYT8 1036 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 CYLDQ9NQC7 956 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 SF3B1O75533 1304 aaKnown RBP eCLIP12.26□□□□□ -0.453e-6■■■■■ 75.9
CDC42BPA-203ENST00000366766 ATP4AP20648 1035 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 AUHQ13825 339 aaKnown RBP12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 EMC1Q8N766 993 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 TMEM109Q9BVC6 243 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 ACTR8Q9H981 624 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 PRPF19Q9UMS4 504 aaKnown RBP12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 CLCN5P51795 746 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 OASLQ15646 514 aaKnown RBP12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 DDR2Q16832 855 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 LYPLAL1Q5VWZ2 237 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 WDR18Q9BV38 432 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 UBA2Q9UBT2 640 aaPredicted RBP12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 DCDC2CA8MYV0 355 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 TALDO1P37837 337 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 GPC2Q8N158 579 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 PRELID2Q8N945 189 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 HDAC7Q8WUI4 952 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 POLR1EQ9GZS1 481 aaKnown RBP12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 KRT75O95678 551 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 IFNGR2P38484 337 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 CACNA2D1P54289 1103 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 BNIP2Q12982 314 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 SQLEQ14534 574 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 TRPC4APQ8TEL6 797 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 IFI35P80217 286 aaPredicted RBP12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 STAG3L4Q8TBR4 150 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 MCOLN3Q8TDD5 553 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 GDPD5Q8WTR4 605 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 ZNF446Q9NWS9 450 aa12.26□□□□□ -0.45
CDC42BPA-203ENST00000366766 CCT8P50990 548 aa12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 HADHBP55084 474 aaKnown RBP12.25□□□□□ -0.45
CDC42BPA-203ENST00000366766 OLFM1Q99784 485 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms