RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 GANCQ8TET4 914 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 GLMNQ92990 594 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 AZIN2Q96A70 460 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 BIRC7Q96CA5 298 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 EEF2KMTQ96G04 330 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 SERPINB11Q96P15 392 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 NT5C1BQ96P26 610 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 METTL14Q9HCE5 456 aaKnown RBP12.87□□□□□ -0.35
MRPL55-209ENST00000366735 DKK4Q9UBT3 224 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 FTSJ1Q9UET6 329 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 GPSM3Q9Y4H4 160 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 SNX11Q9Y5W9 270 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 MYLKQ15746 1914 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 ANKRD11Q6UB99 2663 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-209ENST00000366735 BAHCC1Q9P281 2608 aa12.87□□□□□ -0.35
MRPL55-209ENST00000366735 GOLGA4Q13439 2230 aaKnown RBP12.86□□□□□ -0.35
MRPL55-209ENST00000366735 LRRC72A6NJI9 287 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 E9PAM4 449 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 M0QYV0 167 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 TULP2O00295 520 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 YKT6O15498 198 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 CBFA2T2O43439 604 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 ACSL4O60488 711 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 ATP1A3P13637 1013 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 ABL2P42684 1182 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 STX17P56962 302 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 TBX4P57082 545 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 RACK1P63244 317 aaKnown RBP12.86□□□□□ -0.35
MRPL55-209ENST00000366735 NNTQ13423 1086 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 PTPRNQ16849 979 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 KIF19Q2TAC6 998 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 PIK3R6Q5UE93 754 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 RNF219Q5W0B1 726 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-209ENST00000366735 KIAA0895LQ68EN5 471 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 TMEM270Q6UE05 265 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 SLCO6A1Q86UG4 719 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 ZNF366Q8N895 744 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 KDM1BQ8NB78 822 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 UBA3Q8TBC4 463 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 HSFY1Q96LI6 401 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 PABPC3Q9H361 631 aaKnown RBP12.86□□□□□ -0.35
MRPL55-209ENST00000366735 THAP9Q9H5L6 903 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 SCUBE2Q9NQ36 999 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 PRSS16Q9NQE7 514 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 CEP83Q9Y592 693 aa12.86□□□□□ -0.35
MRPL55-209ENST00000366735 FREM2Q5SZK8 3169 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 LRRC10BA6NIK2 292 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 GOLGA8CPA6NN73 597 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 TAF4O00268 1085 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 PAPSS1O43252 624 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-209ENST00000366735 IGLV3-27P01718 113 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 CAPNS1P04632 268 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 CDK4P11802 303 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 HNF1BP35680 557 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 BNC1Q01954 994 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 SLC45A4Q5BKX6 768 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 ZC3H3Q8IXZ2 948 aaKnown RBP12.85□□□□□ -0.35
MRPL55-209ENST00000366735 PPM1KQ8N3J5 372 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 FIBINQ8TAL6 211 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 MDM1Q8TC05 714 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 NDRG1Q92597 394 aaKnown RBP12.85□□□□□ -0.35
MRPL55-209ENST00000366735 RSPH9Q9H1X1 276 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-209ENST00000366735 SAMSN1Q9NSI8 373 aaKnown RBP12.85□□□□□ -0.35
MRPL55-209ENST00000366735 FBXL12Q9NXK8 326 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 FZD4Q9ULV1 537 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.85□□□□□ -0.35
MRPL55-209ENST00000366735 PCDHB4Q9Y5E5 795 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 ATRXP46100 2492 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 SHROOM3Q8TF72 1996 aa12.85□□□□□ -0.35
MRPL55-209ENST00000366735 A0A1W2PPC4 97 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 EIF4E1BA6NMX2 242 aaKnown RBP12.84□□□□□ -0.35
MRPL55-209ENST00000366735 VILLO15195 856 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 DKK1O94907 266 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 APOEP02649 317 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 SRPRAP08240 638 aaKnown RBP12.84□□□□□ -0.35
MRPL55-209ENST00000366735 ATXN1LP0C7T5 689 aaKnown RBP12.84□□□□□ -0.35
MRPL55-209ENST00000366735 CDK11BP21127 795 aaKnown RBP12.84□□□□□ -0.35
MRPL55-209ENST00000366735 ABCB4P21439 1286 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 EEF1GP26641 437 aaKnown RBP12.84□□□□□ -0.35
MRPL55-209ENST00000366735 CD70P32970 193 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 NNMTP40261 264 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 FMO5P49326 533 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 RGS7P49802 495 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 PMS1P54277 932 aaKnown RBP12.84□□□□□ -0.35
MRPL55-209ENST00000366735 LRMPQ12912 555 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 CNGA2Q16280 664 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 TPD52L1Q16890 204 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-209ENST00000366735 COL28A1Q2UY09 1125 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 HNRNPA1L2Q32P51 320 aaKnown RBP12.84□□□□□ -0.35
MRPL55-209ENST00000366735 CCDC40Q4G0X9 1142 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 PKDCCQ504Y2 493 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 FAM133BQ5BKY9 247 aaKnown RBP12.84□□□□□ -0.35
MRPL55-209ENST00000366735 RFWD3Q6PCD5 774 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 APTXQ7Z2E3 356 aaKnown RBP12.84□□□□□ -0.35
MRPL55-209ENST00000366735 PDZD3Q86UT5 571 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 CARNMT1Q8N4J0 409 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 OXR1Q8N573 874 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 SLC35C1Q96A29 364 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 TTC17Q96AE7 1141 aa12.84□□□□□ -0.35
MRPL55-209ENST00000366735 FAM149B1Q96BN6 582 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms