RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 WBP2Q969T9 261 aa18.54■□□□□ 0.56
CCDC7-203ENST00000362006 QKIQ96PU8 341 aaKnown RBP eCLIP18.54■□□□□ 0.561e-7■■■■■ 31.4
CCDC7-203ENST00000362006 ADAM7Q9H2U9 754 aa18.54■□□□□ 0.56
CCDC7-203ENST00000362006 EPB41L5Q9HCM4 733 aa18.54■□□□□ 0.56
CCDC7-203ENST00000362006 GDF3Q9NR23 364 aa18.54■□□□□ 0.56
CCDC7-203ENST00000362006 RAB21Q9UL25 225 aa18.54■□□□□ 0.56
CCDC7-203ENST00000362006 C2orf16Q68DN1 1984 aa18.54■□□□□ 0.56
CCDC7-203ENST00000362006 TYW5A2RUC4 315 aaKnown RBP18.53■□□□□ 0.56
CCDC7-203ENST00000362006 BHMG1C9JSJ3 638 aaPredicted RBP18.53■□□□□ 0.56
CCDC7-203ENST00000362006 KRT14P02533 472 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 CDH4P55283 916 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 GALNT2Q10471 571 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 GRIN2CQ14957 1233 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 ATAT1Q5SQI0 421 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 CHST9Q7L1S5 443 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 EIF1ADQ8N9N8 165 aaKnown RBP18.53■□□□□ 0.56
CCDC7-203ENST00000362006 ITFG1Q8TB96 612 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 USP13Q92995 863 aaPredicted RBP18.53■□□□□ 0.56
CCDC7-203ENST00000362006 KLC2Q9H0B6 622 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 FAM114A2Q9NRY5 505 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 NEU2Q9Y3R4 380 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 NDC80O14777 642 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 MTSS1O43312 755 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 CLDN11O75508 207 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 TNFRSF8P28908 595 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 CUL1Q13616 776 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 CTC1Q2NKJ3 1217 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 AFMIDQ63HM1 303 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 DUPD1Q68J44 220 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 RFWD3Q6PCD5 774 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 C4orf22Q6V702 233 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 NPWQ8N729 165 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 HDAC11Q96DB2 347 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 RTP4Q96DX8 246 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 EPC1Q9H2F5 836 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 PCDH9Q9HC56 1237 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 GDE1Q9NZC3 331 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 TBC1D14Q9P2M4 693 aa18.53■□□□□ 0.56
CCDC7-203ENST00000362006 DYNC1I1O14576 645 aa18.52■□□□□ 0.56
CCDC7-203ENST00000362006 ACTN2P35609 894 aa18.52■□□□□ 0.56
CCDC7-203ENST00000362006 YBEYP58557 167 aaPredicted RBP18.52■□□□□ 0.56
CCDC7-203ENST00000362006 PRKD1Q15139 912 aaPredicted RBP18.52■□□□□ 0.56
CCDC7-203ENST00000362006 HEATR6Q6AI08 1181 aaKnown RBP18.52■□□□□ 0.56
CCDC7-203ENST00000362006 ARID3BQ8IVW6 561 aaPredicted RBP18.52■□□□□ 0.56
CCDC7-203ENST00000362006 CELF5Q8N6W0 485 aaKnown RBP18.52■□□□□ 0.56
CCDC7-203ENST00000362006 HJURPQ8NCD3 748 aaPredicted RBP18.52■□□□□ 0.56
CCDC7-203ENST00000362006 PNKPQ96T60 521 aa18.52■□□□□ 0.56
CCDC7-203ENST00000362006 TRIM51Q9BSJ1 452 aa18.52■□□□□ 0.56
CCDC7-203ENST00000362006 USP29Q9HBJ7 922 aa18.52■□□□□ 0.56
CCDC7-203ENST00000362006 ZFP37Q9Y6Q3 630 aaPredicted RBP18.52■□□□□ 0.56
CCDC7-203ENST00000362006 NUP210Q8TEM1 1887 aaPredicted RBP18.52■□□□□ 0.56
CCDC7-203ENST00000362006 CNTN5O94779 1100 aa18.52■□□□□ 0.55
CCDC7-203ENST00000362006 STK10O94804 968 aaKnown RBP18.52■□□□□ 0.55
CCDC7-203ENST00000362006 GARSP41250 739 aaKnown RBP18.52■□□□□ 0.55
CCDC7-203ENST00000362006 PPIDQ08752 370 aaKnown RBP18.52■□□□□ 0.55
CCDC7-203ENST00000362006 ALFQ53S48 1182 aa18.52■□□□□ 0.55
CCDC7-203ENST00000362006 BBOF1Q8ND07 529 aa18.52■□□□□ 0.55
CCDC7-203ENST00000362006 CCNYQ8ND76 341 aa18.52■□□□□ 0.55
CCDC7-203ENST00000362006 ING5Q8WYH8 240 aa18.52■□□□□ 0.55
CCDC7-203ENST00000362006 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.52■□□□□ 0.559e-10■■■■■ 79.8
CCDC7-203ENST00000362006 TMA16Q96EY4 203 aaKnown RBP18.52■□□□□ 0.55
CCDC7-203ENST00000362006 TSGA13Q96PP4 275 aa18.52■□□□□ 0.55
CCDC7-203ENST00000362006 FAM129AQ9BZQ8 928 aa18.52■□□□□ 0.55
CCDC7-203ENST00000362006 ASIC3Q9UHC3 531 aa18.52■□□□□ 0.55
CCDC7-203ENST00000362006 NUP205Q92621 2012 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 A0A1B0GVM2 712 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 TCAF2A6NFQ2 919 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 GFRA2O00451 464 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 KCNN4O15554 427 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 RBL1P28749 1068 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 OR1E1P30953 314 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 USP4Q13107 963 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 MPP7Q5T2T1 576 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 FAM71DQ8N9W8 422 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 ZSCAN18Q8TBC5 510 aaPredicted RBP18.51■□□□□ 0.55
CCDC7-203ENST00000362006 HTR3CQ8WXA8 447 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 OTUB2Q96DC9 234 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 RIPOR3Q96MK2 946 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 ZSWIM3Q96MP5 696 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 GAS2L1Q99501 681 aaPredicted RBP18.51■□□□□ 0.55
CCDC7-203ENST00000362006 SMG9Q9H0W8 520 aaKnown RBP18.51■□□□□ 0.55
CCDC7-203ENST00000362006 CLEC1BQ9P126 229 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 ZNF212Q9UDV6 495 aa18.51■□□□□ 0.55
CCDC7-203ENST00000362006 PRRC2BQ5JSZ5 2229 aaKnown RBP18.5■□□□□ 0.55
CCDC7-203ENST00000362006 ARHGAP42A6NI28 874 aa18.5■□□□□ 0.55
CCDC7-203ENST00000362006 SLC9A3R1O14745 358 aaPredicted RBP18.5■□□□□ 0.55
CCDC7-203ENST00000362006 MAP3K6O95382 1288 aa18.5■□□□□ 0.55
CCDC7-203ENST00000362006 IFNB1P01574 187 aa18.5■□□□□ 0.55
CCDC7-203ENST00000362006 CCNCP24863 283 aa18.5■□□□□ 0.55
CCDC7-203ENST00000362006 AP1B1Q10567 949 aa18.5■□□□□ 0.55
CCDC7-203ENST00000362006 COL19A1Q14993 1142 aa18.5■□□□□ 0.55
CCDC7-203ENST00000362006 BRD3Q15059 726 aa18.5■□□□□ 0.55
CCDC7-203ENST00000362006 P3H1Q32P28 736 aa18.5■□□□□ 0.55
CCDC7-203ENST00000362006 PARP15Q460N3 678 aa18.5■□□□□ 0.55
CCDC7-203ENST00000362006 MPPE1Q53F39 396 aa18.5■□□□□ 0.55
CCDC7-203ENST00000362006 TFAP2DQ7Z6R9 452 aa18.5■□□□□ 0.55
CCDC7-203ENST00000362006 ARHGAP12Q8IWW6 846 aa18.5■□□□□ 0.55
CCDC7-203ENST00000362006 LRRC45Q96CN5 670 aa18.5■□□□□ 0.55
CCDC7-203ENST00000362006 PRICKLE1Q96MT3 831 aaPredicted RBP18.5■□□□□ 0.55
CCDC7-203ENST00000362006 S1PR5Q9H228 398 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms