RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MPP5Q8N3R9 675 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 BORCS5Q969J3 196 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 MTG1Q9BT17 334 aaPredicted RBP13□□□□□ -0.33
VAMP1-201ENST00000361716 RAB6CQ9H0N0 254 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 WDR41Q9HAD4 459 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 CXorf21Q9HAI6 301 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 SIRPGQ9P1W8 387 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 FEM1BQ9UK73 627 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 DGKBQ9Y6T7 804 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 V9GYQ6 96 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 KIAA1551Q9HCM1 1747 aa13□□□□□ -0.33
VAMP1-201ENST00000361716 C7orf72A4D263 438 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 TIPRLO75663 272 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 PDGFRAP16234 1089 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF23P17027 643 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 HOXA10P31260 410 aaPredicted RBP12.99□□□□□ -0.33
VAMP1-201ENST00000361716 JAK3P52333 1124 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 PGM5Q15124 567 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 ADRM1Q16186 407 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 CMC1Q7Z7K0 106 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 FAM160B2Q86V87 743 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 SULF1Q8IWU6 871 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 CAPSLQ8WWF8 208 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 PGLYRP2Q96PD5 576 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 JPH1Q9HDC5 661 aaPredicted RBP12.99□□□□□ -0.33
VAMP1-201ENST00000361716 TCF7L2Q9NQB0 619 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 GJA3Q9Y6H8 435 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF541Q9H0D2 1346 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 KANSL1LA0AUZ9 987 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 DHX15O43143 795 aaKnown RBP12.99□□□□□ -0.33
VAMP1-201ENST00000361716 PSAPP07602 524 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 CD247P20963 164 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 ME2P23368 584 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 CAP2P40123 477 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 CCR10P46092 362 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 NKX2-5P52952 324 aaPredicted RBP12.99□□□□□ -0.33
VAMP1-201ENST00000361716 ZACNQ401N2 412 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 ADGRF2Q8IZF7 708 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 DCLK2Q8N568 766 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 MCPH1Q8NEM0 835 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 TFAP2BQ92481 460 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 TAMM41Q96BW9 452 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 SPATA17Q96L03 361 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 PDCD2LQ9BRP1 358 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 CYP26B1Q9NR63 512 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 FAM49BQ9NUQ9 324 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 SLC38A7Q9NVC3 462 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 RNF11Q9Y3C5 154 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 RIPK3Q9Y572 518 aa12.99□□□□□ -0.33
VAMP1-201ENST00000361716 FBXO21O94952 628 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 MAPTP10636 758 aaKnown RBP12.98□□□□□ -0.33
VAMP1-201ENST00000361716 PIK3R1P27986 724 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 GRIA1P42261 906 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 SPIDRQ14159 915 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 PTK2BQ14289 1009 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 MYBPC2Q14324 1141 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 PGS1Q32NB8 556 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 PGM2L1Q6PCE3 622 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 ELMSAN1Q6PJG2 1045 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 C16orf89Q6UX73 402 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 PRR23BQ6ZRT6 265 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 SIX6OS1Q8N1H7 587 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 PARP8Q8N3A8 854 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 RNF149Q8NC42 400 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 ADCY4Q8NFM4 1077 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 TMC2Q8TDI7 906 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 NKD2Q969F2 451 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-201ENST00000361716 SCYL1Q96KG9 808 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 EIF2AQ9BY44 585 aaKnown RBP12.98□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF70Q9UC06 446 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-201ENST00000361716 STK39Q9UEW8 545 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 TMEM191CA6NGB0 347 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 VNN1O95497 513 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 RBL1P28749 1068 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 MIPP30301 263 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 PGGT1BP53609 377 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 YWHAZP63104 245 aaKnown RBP12.98□□□□□ -0.33
VAMP1-201ENST00000361716 ANGEL2Q5VTE6 544 aaKnown RBP12.98□□□□□ -0.33
VAMP1-201ENST00000361716 C4orf19Q8IY42 314 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 KIAA2013Q8IYS2 634 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 CCNYL1Q8N7R7 359 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 PDZD8Q8NEN9 1154 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 SLC35B2Q8TB61 432 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 SLC29A1Q99808 456 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 DHRS4Q9BTZ2 278 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 HERC2P3Q9BVR0 1158 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 RPAP3Q9H6T3 665 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-201ENST00000361716 PALMDQ9NP74 551 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 AP4S1Q9Y587 144 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 TOR1BO14657 336 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 KLF11O14901 512 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 CNOT3O75175 753 aaKnown RBP12.98□□□□□ -0.33
VAMP1-201ENST00000361716 DGAT1O75907 488 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 SERPINE1P05121 402 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 ICAM1P05362 532 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 ARL1P40616 181 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-201ENST00000361716 GLRBP48167 497 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 IREB2P48200 963 aaKnown RBP12.98□□□□□ -0.33
VAMP1-201ENST00000361716 NUMBP49757 651 aa12.98□□□□□ -0.33
VAMP1-201ENST00000361716 ACTR2P61160 394 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms