RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 MYCP01106 439 aaPredicted RBP13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 DBTP11182 482 aaKnown RBP13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 ITFG1Q8TB96 612 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 STRBPQ96SI9 672 aaKnown RBP13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 KIAA1683Q9H0B3 1180 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 DSN1Q9H410 356 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 ENTPD4Q9Y227 616 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 AFF2P51816 1311 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 A0A087WZ62 844 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 PSIP1O75475 530 aaKnown RBP13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 GRIK3Q13003 919 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 LPIN1Q14693 890 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 FAXCQ5TGI0 409 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 PAPD7Q5XG87 772 aaKnown RBP13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 TMEM132CQ8N3T6 1108 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 OR52L1Q8NGH7 329 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 CCDC115Q96NT0 180 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 AGAP1Q9UPQ3 857 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 NCKAP1Q9Y2A7 1128 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 NMT2O60551 498 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 SGCGQ13326 291 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 ZNHIT3Q15649 155 aaPredicted RBP13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 PROSER3Q2NL68 480 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 ATP13A5Q4VNC0 1218 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 PIH1D3Q9NQM4 214 aaKnown RBP13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 HBP1O60381 514 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 FGRP09769 529 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 EPHB3P54753 998 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 GRSF1Q12849 480 aaKnown RBP eCLIP13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 RALGDSQ12967 914 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 USF2Q15853 346 aaPredicted RBP13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 USP7Q93009 1102 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 MTMR12Q9C0I1 747 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 RAB23Q9ULC3 237 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 PTPRTO14522 1441 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 GLI1P08151 1106 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 MAGEA2P43356 314 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 ZNF135P52742 658 aaPredicted RBP13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 BST2Q10589 180 aaKnown RBP13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 LRRC20Q8TCA0 184 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 EFHD2Q96C19 240 aaPredicted RBP13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 ACSF2Q96CM8 615 aaPredicted RBP13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 THAP2Q9H0W7 228 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 A0A0X1KG70 313 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 MTA2O94776 668 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 ADSSP30520 456 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 CCNHP51946 323 aaPredicted RBP13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 PRR5LQ6MZQ0 368 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 ARRDC4Q8NCT1 418 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 KBTBD8Q8NFY9 601 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 PRDM8Q9NQV8 689 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 PRKAG3Q9UGI9 489 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 PCDHB12Q9Y5F1 795 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 NLRP1Q9C000 1473 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 DCDC2CA8MYV0 355 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 TDP2O95551 362 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 SUPT20HL2P0C7V6 817 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 TCF4P15884 667 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 CDK16Q00536 496 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 CBFBQ13951 182 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 GALNT3Q14435 633 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 SYTL5Q8TDW5 730 aaPredicted RBP13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 GLT1D1Q96MS3 346 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 FAM50BQ9Y247 325 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 PMF1-BGLAPU3KQ54 211 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 RIPK2O43353 540 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 NRG3P56975 720 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 ERVK-24P63145 666 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 PTSQ03393 145 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 MSLNQ13421 630 aaPredicted RBP13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 PAGE2BQ5JRK9 111 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 HECTD3Q5T447 861 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 SLC26A11Q86WA9 606 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 MYLPFQ96A32 169 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 HPDLQ96IR7 371 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 TBCDQ9BTW9 1192 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 PLCL2Q9UPR0 1127 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 SPEF1Q9Y4P9 236 aa13.45□□□□□ -0.26
SRGAP3-201ENST00000360413 SCGNO76038 276 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 HALP42357 657 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 FBXO25Q8TCJ0 367 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 PLEKHF1Q96S99 279 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 ALDH8A1Q9H2A2 487 aaPredicted RBP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 CPVLQ9H3G5 476 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 FBXO44Q9H4M3 255 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 LOC110117498-PIK3R3F6TDL0 507 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 GNB5O14775 395 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 MED24O75448 989 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 FARP2O94887 1054 aaPredicted RBP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 TAF6P49848 677 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 RPS6KA3P51812 740 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 SMIM11AP58511 58 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 ZNF844Q08AG5 666 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 CCSAPQ6IQ19 270 aaPredicted RBP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 ZBTB46Q86UZ6 589 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 ADGRF4Q8IZF3 695 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 INTS7Q9NVH2 962 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms