RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 FBXO44Q9H4M3 255 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 CATSPERBQ9H7T0 1116 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 SLC17A7Q9P2U7 560 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 F5H423 210 aaPredicted RBP18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 AP3B1O00203 1094 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 TADA2AO75478 443 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 CSH1P0DML2 217 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 CSH2P0DML3 217 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 HOXC13P31276 330 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 PRMT2P55345 433 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 SESN2P58004 480 aaPredicted RBP18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 CCDC15Q0P6D6 951 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 SF3A3Q12874 501 aaKnown RBP eCLIP18.76■□□□□ 0.591e-6■■■■■ 45.3
PDLIM7-203ENST00000359895 BFSP2Q13515 415 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 TEX44Q53QW1 395 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 SPANXN3Q5MJ09 141 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 TRMT10BQ6PF06 316 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 TIFABQ6ZNK6 161 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 TNS4Q8IZW8 715 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 OXNAD1Q96HP4 312 aaPredicted RBP18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 TSGA13Q96PP4 275 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 RXFP1Q9HBX9 757 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 ABCF3Q9NUQ8 709 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 ABI2Q9NYB9 513 aaPredicted RBP18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 SLC12A4Q9UP95 1085 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 SCML2Q9UQR0 700 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 SNX10Q9Y5X0 201 aa18.76■□□□□ 0.59
PDLIM7-203ENST00000359895 POLBP06746 335 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 ETV4P43268 484 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 MAGEA11P43364 429 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 NRG1Q02297 640 aaPredicted RBP18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 PRPSAP1Q14558 356 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 FYB2Q5VWT5 728 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 SCD5Q86SK9 330 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 MON1AQ86VX9 555 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 TRIM42Q8IWZ5 723 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 ABI1Q8IZP0 508 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 NUP93Q8N1F7 819 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 CCDC63Q8NA47 563 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 ARNTL2Q8WYA1 636 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 TBC1D31Q96DN5 1066 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 SERPINB11Q96P15 392 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.75■□□□□ 0.598e-9■■■■□ 19.6
PDLIM7-203ENST00000359895 MANSC1Q9H8J5 431 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 PCDHB5Q9Y5E4 795 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 USH1CQ9Y6N9 552 aa18.75■□□□□ 0.59
PDLIM7-203ENST00000359895 OR6C75A6NL08 312 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 PAGE1O75459 146 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 OR4Q2P0C623 313 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 CCNCP24863 283 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 DNAJB2P25686 324 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 ALDH3A1P30838 453 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 NIPAL4Q0D2K0 466 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 FRG1Q14331 258 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 CRYMQ14894 314 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 SPRED3Q2MJR0 410 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 RWDD4Q6NW29 188 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 MSANTD2Q6P1R3 559 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 ZNF276Q8N554 614 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 ZNF398Q8TD17 642 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 TEKT5Q96M29 485 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 LRRC40Q9H9A6 602 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 CASS4Q9NQ75 786 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 SYBUQ9NX95 663 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 BFARQ9NZS9 450 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 PRG3Q9Y2Y8 225 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 PCDHB7Q9Y5E2 793 aa18.74■□□□□ 0.59
PDLIM7-203ENST00000359895 ZBTB24O43167 697 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 RFPL1O75677 317 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 TROVE2P10155 538 aaKnown RBP eCLIP18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 SLC2A3P11169 496 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 NPY2RP49146 381 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 GALNTL6Q49A17 601 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 VARS2Q5ST30 1063 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 MANEALQ5VSG8 457 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 KCTD11Q693B1 232 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 ACMSDQ8TDX5 336 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 SPOCK2Q92563 424 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 CASP10Q92851 521 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 PPP1R2P1Q96PQ5 205 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 FAM111AQ96PZ2 611 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 SRPK1Q96SB4 655 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 SIK2Q9H0K1 926 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 SLCO1B3Q9NPD5 702 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 FNIP2Q9P278 1114 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 DNAJB4Q9UDY4 337 aa18.73■□□□□ 0.59
PDLIM7-203ENST00000359895 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-203ENST00000359895 A0A1W2PQH9 124 aa18.72■□□□□ 0.59
PDLIM7-203ENST00000359895 MAGEB16A2A368 324 aa18.72■□□□□ 0.59
PDLIM7-203ENST00000359895 ARHGAP42A6NI28 874 aa18.72■□□□□ 0.59
PDLIM7-203ENST00000359895 ENPP3O14638 875 aa18.72■□□□□ 0.59
PDLIM7-203ENST00000359895 UGT1A9O60656 530 aa18.72■□□□□ 0.59
PDLIM7-203ENST00000359895 UBOX5O94941 541 aa18.72■□□□□ 0.59
PDLIM7-203ENST00000359895 IL1BP01584 269 aa18.72■□□□□ 0.59
PDLIM7-203ENST00000359895 SRGAP2BP0DMP2 458 aa18.72■□□□□ 0.59
PDLIM7-203ENST00000359895 GRK4P32298 578 aa18.72■□□□□ 0.59
PDLIM7-203ENST00000359895 MGAT5Q09328 741 aa18.72■□□□□ 0.59
PDLIM7-203ENST00000359895 ZBTB17Q13105 803 aa18.72■□□□□ 0.59
PDLIM7-203ENST00000359895 CTXN3Q4LDR2 81 aa18.72■□□□□ 0.59
PDLIM7-203ENST00000359895 ZNF280DQ6N043 979 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms