RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ARL10Q8N8L6 244 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 HDAC7Q8WUI4 952 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 GANQ9H2C0 597 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 GGA3Q9NZ52 723 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 MYO5CQ9NQX4 1742 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 SF3B1O75533 1304 aaKnown RBP eCLIP16.33■□□□□ 0.21e-6■■■■■ 72.5
COL18A1-203ENST00000359759 KCNH1O95259 989 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 AMPD1P23109 780 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 IDH2P48735 452 aaKnown RBP16.33■□□□□ 0.2
COL18A1-203ENST00000359759 MYBPC2Q14324 1141 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 C16orf59Q7L2K0 433 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 IPCEF1Q8WWN9 437 aaPredicted RBP16.33■□□□□ 0.2
COL18A1-203ENST00000359759 PIGUQ9H490 435 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 TRPM5Q9NZQ8 1165 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 TYMPP19971 482 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 CCR1P32246 355 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 SPANXN3Q5MJ09 141 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 MZT2AQ6P582 158 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 NANOGNBQ7Z5D8 188 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 POC5Q8NA72 575 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 OR56A4Q8NGH8 313 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 TEKT5Q96M29 485 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.33■□□□□ 0.2
COL18A1-203ENST00000359759 VAPBO95292 243 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 MYL4P12829 197 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 COX7A2P14406 83 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 HPCAL1P37235 193 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 PRKAG1P54619 331 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 DET1Q7L5Y6 550 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 ACTL9Q8TC94 416 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 MAP3K14Q99558 947 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 SLC35C2Q9NQQ7 365 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 CMTM6Q9NX76 183 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 C2CD2Q9Y426 696 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 TPP1O14773 563 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 MICAL2O94851 1124 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 PTENP60484 403 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 ELF3P78545 371 aaPredicted RBP16.32■□□□□ 0.2
COL18A1-203ENST00000359759 CYP24A1Q07973 514 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 ZNF844Q08AG5 666 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 SLC41A1Q8IVJ1 513 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 ZNF184Q99676 751 aaPredicted RBP16.32■□□□□ 0.2
COL18A1-203ENST00000359759 AHSPQ9NZD4 102 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 ARHGAP20Q9P2F6 1191 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 FAM86B1E9PN63 330 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 CAPN15O75808 1086 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 GJB6O95452 261 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 GSTT1P30711 240 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 PPATQ06203 517 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 RNF19BQ6ZMZ0 732 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 CLYBLQ8N0X4 340 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 REEP1Q9H902 201 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 COMMD9Q9P000 198 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 ARHGAP28Q9P2N2 729 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 OGDHLQ9ULD0 1010 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 EPN2O95208 641 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 ADIGQ0VDE8 80 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 RGS21Q2M5E4 152 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 RPRD1BQ9NQG5 326 aaKnown RBP16.32■□□□□ 0.2
COL18A1-203ENST00000359759 ZNRF3Q9ULT6 936 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 CCL15-CCL14A0A0B4J2E2 113 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 PSIP1O75475 530 aaKnown RBP16.32■□□□□ 0.2
COL18A1-203ENST00000359759 GPR1P46091 355 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 NEK3P51956 506 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 CCL15Q16663 113 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 RNASE12Q5GAN4 147 aaKnown RBP16.32■□□□□ 0.2
COL18A1-203ENST00000359759 HLA-DQA1Q5Y7H0 255 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 TMC3Q7Z5M5 1100 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 ARHGEF19Q8IW93 802 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 L2HGDHQ9H9P8 463 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 CDHR5Q9HBB8 845 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 ETAA1Q9NY74 926 aa16.32■□□□□ 0.2
COL18A1-203ENST00000359759 CXCL8P10145 99 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 ACAT1P24752 427 aaKnown RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 STARP49675 285 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 OLFML2AQ68BL7 652 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 PEG10Q86TG7 708 aaKnown RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 FRMD6Q96NE9 622 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 MTIF3Q9H2K0 278 aaKnown RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 PCDH9Q9HC56 1237 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 TCEA3O75764 348 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 CHN2P52757 468 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 FBXO16Q8IX29 292 aaPredicted RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 TMEM169Q96HH4 297 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 GJD4Q96KN9 370 aaPredicted RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 FBXO28Q9NVF7 368 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 A0A087WXM4 84 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 A0A0A6YYK5 440 aaPredicted RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 LIN7AO14910 233 aaPredicted RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 ADCY6O43306 1168 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 RGS14O43566 566 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 PGM3O95394 542 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 PRLRP16471 622 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 CRABP2P29373 138 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 NAMPTP43490 491 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 PSMD4P55036 377 aaKnown RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 PDIA6Q15084 440 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 ZC3H7AQ8IWR0 971 aaKnown RBP16.31■□□□□ 0.2
COL18A1-203ENST00000359759 RHOBTB2Q9BYZ6 727 aa16.31■□□□□ 0.2
COL18A1-203ENST00000359759 GPR182O15218 404 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms