RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 MGARPQ8TDB4 240 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 TFB1MQ8WVM0 346 aaKnown RBP12.99□□□□□ -0.33
GGPS1-202ENST00000358966 P2RY11Q96G91 374 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 SERPINB12Q96P63 405 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 QKIQ96PU8 341 aaKnown RBP eCLIP12.99□□□□□ -0.33
GGPS1-202ENST00000358966 ELAC1Q9H777 363 aaKnown RBP12.99□□□□□ -0.33
GGPS1-202ENST00000358966 PPANQ9NQ55 473 aaKnown RBP12.99□□□□□ -0.33
GGPS1-202ENST00000358966 MPP6Q9NZW5 540 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 SLC12A6Q9UHW9 1150 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 TBX21Q9UL17 535 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 ZNF510Q9Y2H8 683 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 PRRC2BQ5JSZ5 2229 aaKnown RBP12.99□□□□□ -0.33
GGPS1-202ENST00000358966 EXOC1LA0A1B0GW35 172 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 BCLAF3A2AJT9 711 aaKnown RBP12.99□□□□□ -0.33
GGPS1-202ENST00000358966 E7EVH7 732 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 IRAK2O43187 625 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 FGFR3P22607 806 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 DNAJB2P25686 324 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 GJA8P48165 433 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 PPP2R2AP63151 447 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 SPARCL1Q14515 664 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 LRRC14Q15048 493 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 SPDYCQ5MJ68 293 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 SPOUT1Q5T280 376 aaKnown RBP12.99□□□□□ -0.33
GGPS1-202ENST00000358966 EXOC3L1Q86VI1 746 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 PYROXD1Q8WU10 500 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 HTR3CQ8WXA8 447 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 ZNF333Q96JL9 665 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 FRMD8P1Q9BZ68 369 aaPredicted RBP12.99□□□□□ -0.33
GGPS1-202ENST00000358966 PCDHB5Q9Y5E4 795 aa12.99□□□□□ -0.33
GGPS1-202ENST00000358966 WDR27A2RRH5 827 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 RNF103O00237 685 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 USP12O75317 370 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 PAGE1O75459 146 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 DGKIO75912 1065 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 CXCL10P02778 98 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 INHBCP55103 352 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 EFEMP1Q12805 493 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 DCP1BQ8IZD4 617 aaKnown RBP12.98□□□□□ -0.33
GGPS1-202ENST00000358966 CFAP36Q96G28 342 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 AGAP3Q96P47 875 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 FAM129AQ9BZQ8 928 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 SCAMP3O14828 347 aaKnown RBP12.98□□□□□ -0.33
GGPS1-202ENST00000358966 SYN3O14994 580 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 ALDH7A1P49419 539 aaKnown RBP12.98□□□□□ -0.33
GGPS1-202ENST00000358966 ARL4CP56559 192 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 TAF10Q12962 218 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 MRPL58Q14197 206 aaKnown RBP12.98□□□□□ -0.33
GGPS1-202ENST00000358966 AGBL2Q5U5Z8 902 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 RASIP1Q5U651 963 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 C3orf62Q6ZUJ4 267 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 C14orf80Q86SX3 495 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 CAND1Q86VP6 1230 aaKnown RBP12.98□□□□□ -0.33
GGPS1-202ENST00000358966 SRRM1Q8IYB3 904 aaKnown RBP12.98□□□□□ -0.33
GGPS1-202ENST00000358966 NUP93Q8N1F7 819 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 AGAP11Q8TF27 550 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 OCEL1Q9H607 264 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 SPATA7Q9P0W8 599 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 PRUNE2Q8WUY3 3088 aa12.98□□□□□ -0.33
GGPS1-202ENST00000358966 TRIM43BA6NCK2 446 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ALOX15BO15296 676 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ATF6P18850 670 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 PSMB4P28070 264 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 OR1D2P34982 312 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 IFNAR2P48551 515 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ANKRD20A2Q5SQ80 823 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ANKRD20A1Q5TYW2 823 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ANKRD20A3Q5VUR7 823 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ARHGEF18Q6ZSZ5 1173 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ZNF534Q76KX8 674 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 OTOP2Q7RTS6 562 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 CDKL3Q8IVW4 592 aaPredicted RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 PDIK1LQ8N165 341 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 LRRC43Q8N309 656 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 USP33Q8TEY7 942 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 APBB2Q92870 758 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ARHGEF2Q92974 986 aaKnown RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 TRIM43Q96BQ3 446 aaPredicted RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 PGM2Q96G03 612 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 ZNF419Q96HQ0 510 aaPredicted RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 TTPALQ9BTX7 342 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 CRISPLD2Q9H0B8 497 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 GALNT8Q9NY28 637 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 IL1RAPL1Q9NZN1 696 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 PAK5Q9P286 719 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 NEU3Q9UQ49 428 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 TTLL3Q9Y4R7 772 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 IGLV3-25P01717 112 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 F7P08709 466 aaPredicted RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 CHN1P15882 459 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 MDH1P40925 334 aaKnown RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 WASHC5Q12768 1159 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 NFE2Q16621 373 aaPredicted RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 UNC5BQ8IZJ1 945 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
GGPS1-202ENST00000358966 FBF1Q8TES7 1133 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 IRGQQ8WZA9 623 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 FBXO32Q969P5 355 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 NTAN1Q96AB6 310 aa12.97□□□□□ -0.33
GGPS1-202ENST00000358966 RTP4Q96DX8 246 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms