RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 PARP8Q8N3A8 854 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 CMTM5Q96DZ9 223 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 PANX2Q96RD6 677 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 ABHD10Q9NUJ1 306 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 OSER1Q9NX31 292 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 ABI3Q9P2A4 366 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 ZNF232Q9UNY5 417 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 ERVK-11Q9UQG0 969 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 GLI2P10070 1586 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 GLP2RO95838 553 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 CYP2A6P11509 494 aaPredicted RBP9.95□□□□□ -0.82
CHD3-202ENST00000358181 PRKCEQ02156 737 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 ABRQ12979 859 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 SP140Q13342 867 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 MTF1Q14872 753 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 CWF19L1Q69YN2 538 aaKnown RBP9.95□□□□□ -0.82
CHD3-202ENST00000358181 CNSTQ6PJW8 725 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 GIPC3Q8TF64 312 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 PHF21BQ96EK2 531 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 NOL6Q9H6R4 1146 aaKnown RBP9.95□□□□□ -0.82
CHD3-202ENST00000358181 GPATCH2LQ9NWQ4 482 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.95□□□□□ -0.82
CHD3-202ENST00000358181 CRTAMO95727 393 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 IL1R1P14778 569 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 PLEKHA7Q6IQ23 1121 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 GPR141Q7Z602 305 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 SATL1Q86VE3 508 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 SP8Q8IXZ3 490 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 METTL21AQ8WXB1 218 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 PHF20Q9BVI0 1012 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 ZNF70Q9UC06 446 aaPredicted RBP9.95□□□□□ -0.82
CHD3-202ENST00000358181 FARP2O94887 1054 aaPredicted RBP9.94□□□□□ -0.82
CHD3-202ENST00000358181 RBP3P10745 1247 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 PRKAR2AP13861 404 aaKnown RBP9.94□□□□□ -0.82
CHD3-202ENST00000358181 RGS1Q08116 209 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 CASP8Q14790 479 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 ALG1LQ6GMV1 187 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 NAPEPLDQ6IQ20 393 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 HSDL2Q6YN16 418 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 PARP9Q8IXQ6 854 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 EDEM1Q92611 657 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 NSUN4Q96CB9 384 aaKnown RBP9.94□□□□□ -0.82
CHD3-202ENST00000358181 CELF6Q96J87 481 aaKnown RBP9.94□□□□□ -0.82
CHD3-202ENST00000358181 CEP41Q9BYV8 373 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 CCSER1Q9C0I3 900 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 FAM192AQ9GZU8 254 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 NEU2Q9Y3R4 380 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 PREX2Q70Z35 1606 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 CLASP1Q7Z460 1538 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TNS3Q68CZ2 1445 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TBC1D3DA0A087WVF3 549 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TBC1D3IA0A087WXS9 549 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 A0A087WZ62 844 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TBC1D3EA0A087X179 549 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TBC1D3KA0A087X1G2 549 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TBC1D3FA6NER0 549 aaPredicted RBP9.94□□□□□ -0.82
CHD3-202ENST00000358181 TBC1D3LB9A6J9 549 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 FFAR2O15552 330 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 HOXA2O43364 376 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 RGS10O43665 173 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TBC1D3HP0C7X1 549 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 NR2F1P10589 423 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 S100A1P23297 94 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 CDC25BP30305 580 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 RPA3P35244 121 aaPredicted RBP9.94□□□□□ -0.82
CHD3-202ENST00000358181 IL12RB1P42701 662 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 PFKPQ01813 784 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TBC1D3GQ6DHY5 549 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TBC1D3CQ6IPX1 549 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TBC1D3Q8IZP1 549 aaPredicted RBP9.94□□□□□ -0.82
CHD3-202ENST00000358181 ZNF615Q8N8J6 731 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TTLL2Q9BWV7 592 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TUBGCP4Q9UGJ1 667 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 ZNF214Q9UL59 606 aaPredicted RBP9.94□□□□□ -0.82
CHD3-202ENST00000358181 TELO2Q9Y4R8 837 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 RGL2O15211 777 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 PSTPIP1O43586 416 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 AP3M2P53677 418 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 CHAF1BQ13112 559 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 SGCBQ16585 318 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 EFHC1Q5JVL4 640 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 DAB2IPQ5VWQ8 1189 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 SLC9A4Q6AI14 798 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 SLC4A11Q8NBS3 891 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TFR2Q9UP52 801 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 ANXA9O76027 345 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 HPCAL1P37235 193 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 USP4Q13107 963 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 FBXO16Q8IX29 292 aaPredicted RBP9.94□□□□□ -0.82
CHD3-202ENST00000358181 GUF1Q8N442 669 aaKnown RBP9.94□□□□□ -0.82
CHD3-202ENST00000358181 C7orf25Q9BPX7 421 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 PIH1D1Q9NWS0 290 aaKnown RBP9.94□□□□□ -0.82
CHD3-202ENST00000358181 MOCS1Q9NZB8 636 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 AP4E1Q9UPM8 1137 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TLL1O43897 1013 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 OR56A5P0C7T3 313 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 DSG1Q02413 1049 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 PTGISQ16647 500 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 MPPE1Q53F39 396 aa9.94□□□□□ -0.82
CHD3-202ENST00000358181 TFDP3Q5H9I0 405 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms