RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 SLC7A14Q8TBB6 771 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 KIF12Q96FN5 646 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 HSFY1Q96LI6 401 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 FDXACB1Q9BRP7 624 aaPredicted RBP18.13■□□□□ 0.49
RTN4-204ENST00000357732 PLK2Q9NYY3 685 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 FZD10Q9ULW2 581 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 PSAT1Q9Y617 370 aa18.13■□□□□ 0.49
RTN4-204ENST00000357732 CITO14578 2027 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 DCXO43602 365 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 ATP9BO43861 1147 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 DCAF4L1Q3SXM0 396 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 LPCAT4Q643R3 524 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 UGT2A3Q6UWM9 527 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 CLEC14AQ86T13 490 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 RSPH3Q86UC2 560 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 P2RY11Q96G91 374 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 MRPL45Q9BRJ2 306 aaKnown RBP18.12■□□□□ 0.49
RTN4-204ENST00000357732 CYP4F11Q9HBI6 524 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 SYBUQ9NX95 663 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 RAB26Q9ULW5 256 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 ERI2A8K979 691 aaKnown RBP18.12■□□□□ 0.49
RTN4-204ENST00000357732 TIMM44O43615 452 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 TRIM13O60858 407 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 GOT1P17174 413 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 DNAJB1P25685 340 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 ARRB2P32121 409 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 CSE1LP55060 971 aaKnown RBP18.12■□□□□ 0.49
RTN4-204ENST00000357732 IGBP1P78318 339 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 HPS6Q86YV9 775 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 PQLC1Q8N2U9 271 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 CCDC185Q8N715 623 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 LRRN4Q8WUT4 740 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 NAT14Q8WUY8 206 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 CCDC124Q96CT7 223 aaKnown RBP18.12■□□□□ 0.49
RTN4-204ENST00000357732 DTNAQ9Y4J8 743 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 RPS6KL1Q9Y6S9 549 aa18.12■□□□□ 0.49
RTN4-204ENST00000357732 SLCO1B7G3V0H7 640 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 CNMDO75829 334 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 TFE3P19532 575 aaPredicted RBP18.11■□□□□ 0.49
RTN4-204ENST00000357732 MATKP42679 507 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 MAP7Q14244 749 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 PAFAH1B3Q15102 231 aaKnown RBP18.11■□□□□ 0.49
RTN4-204ENST00000357732 RARS2Q5T160 578 aaKnown RBP18.11■□□□□ 0.49
RTN4-204ENST00000357732 TMEM135Q86UB9 458 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 PHTF2Q8N3S3 785 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 DCLK2Q8N568 766 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 RP9Q8TA86 221 aaKnown RBP18.11■□□□□ 0.49
RTN4-204ENST00000357732 DLG3Q92796 817 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 CPB2Q96IY4 423 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 B3GNT5Q9BYG0 378 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 TCF7L2Q9NQB0 619 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 FAM49BQ9NUQ9 324 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 SNX9Q9Y5X1 595 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 MAGEB16A2A368 324 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 RGSL1A5PLK6 1076 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 RGS2P41220 211 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 ERFP50548 548 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 CRADDP78560 199 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 FOLH1Q04609 750 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 IFRD2Q12894 506 aaPredicted RBP18.11■□□□□ 0.49
RTN4-204ENST00000357732 DLG1Q12959 904 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 HERC3Q15034 1050 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 SLC25A52Q3SY17 297 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 ATG14Q6ZNE5 492 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 ALDH16A1Q8IZ83 802 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.11■□□□□ 0.493e-10■■■■■ 28.4
RTN4-204ENST00000357732 PGBD4Q96DM1 585 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 LGMNQ99538 433 aa18.11■□□□□ 0.49
RTN4-204ENST00000357732 ILKAPQ9H0C8 392 aaPredicted RBP18.11■□□□□ 0.49
RTN4-204ENST00000357732 G3V2L1 256 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 MFSD11O43934 449 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 TSPAN1O60635 241 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 CYP2C9P11712 490 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 ALDH1A3P47895 512 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 HSPA13P48723 471 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 SNAPC2Q13487 334 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 TTLL4Q14679 1199 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 PPM1JQ5JR12 505 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 CRYBG2Q8N1P7 616 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 CPSF7Q8N684 471 aaKnown RBP18.1■□□□□ 0.49
RTN4-204ENST00000357732 RNPEPQ9H4A4 650 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 NSMCE4AQ9NXX6 385 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 GPRC5DQ9NZD1 345 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 SLC17A6Q9P2U8 582 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 ANKRD6Q9Y2G4 727 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 EVPLQ92817 2033 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 ZBTB14O43829 449 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 INSRRP14616 1297 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 PSMB4P28070 264 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 AIF1P55008 147 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 LRRC36Q1X8D7 754 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 SOWAHAQ2M3V2 549 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 TCHHL1Q5QJ38 904 aaPredicted RBP18.1■□□□□ 0.49
RTN4-204ENST00000357732 VWA5B1Q5TIE3 1220 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 PDZD4Q76G19 769 aaPredicted RBP18.1■□□□□ 0.49
RTN4-204ENST00000357732 ZNF781Q8N8C0 355 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 KYQ8NBH2 561 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 SHKBP1Q8TBC3 707 aa18.1■□□□□ 0.49
RTN4-204ENST00000357732 ZFRQ96KR1 1074 aaKnown RBP18.1■□□□□ 0.49
RTN4-204ENST00000357732 MRGBPQ9NV56 204 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms