RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 SCGNO76038 276 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 PRKCGP05129 697 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 PRKAR1AP10644 381 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 NUMBP49757 651 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 OTOAQ7RTW8 1153 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 KRT77Q7Z794 578 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 TMPRSS6Q8IU80 811 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 ATG16L2Q8NAA4 619 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 VPS33AQ96AX1 596 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 NGRNQ9NPE2 291 aaKnown RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 SMARCB1Q12824 385 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 ARHGEF6Q15052 776 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 RAP1GAP2Q684P5 730 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 SNX29P2Q8IUI4 249 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 FITM2Q8N6M3 262 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 SLC5A11Q8WWX8 675 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 EAF2Q96CJ1 260 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 PPCSQ9HAB8 311 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 TRPM2O94759 1503 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 RGL2O15211 777 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 LBPP18428 481 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 MPP2Q14168 576 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 PLEKHG6Q3KR16 790 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 PCDH20Q8N6Y1 951 aaKnown RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 JPH3Q8WXH2 748 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 TCEAL3Q969E4 200 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 C18orf25Q96B23 403 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 TRIT1Q9H3H1 467 aaKnown RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 ACAD9Q9H845 621 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 DYNC1LI2O43237 492 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 RIPK2O43353 540 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 LYPLA1O75608 230 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 CHRM5P08912 532 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 BNC1Q01954 994 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 PCDH1Q08174 1060 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 GNA13Q14344 377 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 PPP1R3AQ16821 1122 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 CCDC157Q569K6 752 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 DTX3Q8N9I9 347 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 CPNE2Q96FN4 548 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 APOL2Q9BQE5 337 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 PSD2Q9BQI7 771 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 MECRQ9BV79 373 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 ASPNQ9BXN1 380 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 EFCAB1Q9HAE3 211 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 HIF3AQ9Y2N7 669 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 RTCBQ9Y3I0 505 aaKnown RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 MROH5Q6ZUA9 1318 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 TRAV20A0A0B4J274 112 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 RGSL1A5PLK6 1076 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 NCF1BA6NI72 391 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 NCF1CA8MVU1 366 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 TNFRSF10AO00220 468 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 CRTAMO95727 393 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 NCF1P14598 390 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 CCNB1P14635 433 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 ITIH1P19827 911 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 IL15P40933 162 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 MCCD1P59942 119 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 LRRC63Q05C16 580 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 MSLNQ13421 630 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 N4BP2L1Q5TBK1 243 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 NPLOC4Q8TAT6 608 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 ACMSDQ8TDX5 336 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 TMEM246Q9BRR3 403 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 EBF2Q9HAK2 575 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 PRMT8Q9NR22 394 aaPredicted RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 FETUBQ9UGM5 382 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 VANGL2Q9ULK5 521 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 NOD1Q9Y239 953 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 MADDQ8WXG6 1647 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 PABPC1P11940 636 aaKnown RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 CES1P23141 567 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 KLRC1P26715 233 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 MGAT5Q09328 741 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 PKN2Q16513 984 aaKnown RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 UBE2SQ16763 222 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 TTC27Q6P3X3 843 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 THUMPD3Q9BV44 507 aaKnown RBP6.96□□□□□ -1.3
NF1-201ENST00000356175 XKR8Q9H6D3 395 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 PCNX2A6NKB5 2137 aa6.96□□□□□ -1.3
NF1-201ENST00000356175 TOPBP1Q92547 1522 aa6.95□□□□□ -1.3
NF1-201ENST00000356175 RECQL5O94762 991 aaPredicted RBP6.95□□□□□ -1.3
NF1-201ENST00000356175 CNPP09543 421 aaKnown RBP6.95□□□□□ -1.3
NF1-201ENST00000356175 ABCE1P61221 599 aaKnown RBP6.95□□□□□ -1.3
NF1-201ENST00000356175 ERVK-25P63136 954 aa6.95□□□□□ -1.3
NF1-201ENST00000356175 SLC18A2Q05940 514 aa6.95□□□□□ -1.3
NF1-201ENST00000356175 ILF3Q12906 894 aaKnown RBP eCLIP6.95□□□□□ -1.33e-9■■■□□ 15
NF1-201ENST00000356175 PROSER1Q86XN7 944 aa6.95□□□□□ -1.3
NF1-201ENST00000356175 FOXRED2Q8IWF2 684 aa6.95□□□□□ -1.3
NF1-201ENST00000356175 RTKN2Q8IZC4 609 aa6.95□□□□□ -1.3
NF1-201ENST00000356175 BOLLQ8N9W6 283 aaKnown RBP6.95□□□□□ -1.3
NF1-201ENST00000356175 ERVK-6Q9BXR3 956 aa6.95□□□□□ -1.3
NF1-201ENST00000356175 FRMD8Q9BZ67 464 aaPredicted RBP6.95□□□□□ -1.3
NF1-201ENST00000356175 INO80BQ9C086 356 aaPredicted RBP6.95□□□□□ -1.3
NF1-201ENST00000356175 GDF3Q9NR23 364 aa6.95□□□□□ -1.3
NF1-201ENST00000356175 CMTM6Q9NX76 183 aa6.95□□□□□ -1.3
NF1-201ENST00000356175 ERVK-18Q9QC07 812 aa6.95□□□□□ -1.3
NF1-201ENST00000356175 ASH2LQ9UBL3 628 aa6.95□□□□□ -1.3
NF1-201ENST00000356175 IPO11Q9UI26 975 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms