RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 CNTN5O94779 1100 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 SEC31AO94979 1220 aaKnown RBP16.03■□□□□ 0.16
CTSA-202ENST00000354880 LATS1O95835 1130 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 ITIH2P19823 946 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 SLC6A4P31645 630 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 ACTN2P35609 894 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 IRAK1P51617 712 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 PLTPP55058 493 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 GALNT2Q10471 571 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 AP1B1Q10567 949 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 GPS1Q13098 491 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 PRKD1Q15139 912 aaPredicted RBP16.03■□□□□ 0.16
CTSA-202ENST00000354880 TEAD2Q15562 447 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 SLC5A9Q2M3M2 681 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 C5orf22Q49AR2 442 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 ALFQ53S48 1182 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 BEND6Q5SZJ8 279 aaPredicted RBP16.03■□□□□ 0.16
CTSA-202ENST00000354880 ADGRF1Q5T601 910 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 RFWD3Q6PCD5 774 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 LGI2Q8N0V4 545 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 AENQ8WTP8 325 aaKnown RBP16.03■□□□□ 0.16
CTSA-202ENST00000354880 HTR3CQ8WXA8 447 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 CELF6Q96J87 481 aaKnown RBP16.03■□□□□ 0.16
CTSA-202ENST00000354880 DDX50Q9BQ39 737 aaKnown RBP16.03■□□□□ 0.16
CTSA-202ENST00000354880 FERMT1Q9BQL6 677 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 FAM129AQ9BZQ8 928 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 BRD8Q9H0E9 1235 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 NEUROG2Q9H2A3 272 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 NDFIP2Q9NV92 336 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 TMEM248Q9NWD8 314 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 SOBPA7XYQ1 873 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 ZNF197O14709 1029 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 GARSP41250 739 aaKnown RBP16.03■□□□□ 0.16
CTSA-202ENST00000354880 RGS19P49795 217 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 NRLP54845 237 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 NTHL1P78549 312 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 P3H1Q32P28 736 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 PRSS36Q5K4E3 855 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 EMBQ6PCB8 327 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 ZDHHC24Q6UX98 284 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 TMC5Q6UXY8 1006 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 TFAP2DQ7Z6R9 452 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 ARHGAP12Q8IWW6 846 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 C12orf76Q8N812 135 aaPredicted RBP16.03■□□□□ 0.16
CTSA-202ENST00000354880 BBOF1Q8ND07 529 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 VN1R2Q8NFZ6 395 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 FBXO25Q8TCJ0 367 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 SMG7Q92540 1137 aaKnown RBP16.03■□□□□ 0.16
CTSA-202ENST00000354880 LRRC45Q96CN5 670 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 HDAC11Q96DB2 347 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 IGFLR1Q9H665 355 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 TASP1Q9H6P5 420 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 SFXN1Q9H9B4 322 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 PIDD1Q9HB75 910 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 ZDHHC18Q9NUE0 388 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 STOML2Q9UJZ1 356 aa16.03■□□□□ 0.16
CTSA-202ENST00000354880 LSM7Q9UK45 103 aaKnown RBP16.03■□□□□ 0.16
CTSA-202ENST00000354880 GREM1O60565 184 aa16.02■□□□□ 0.16
CTSA-202ENST00000354880 ZNF189O75820 626 aaPredicted RBP16.02■□□□□ 0.16
CTSA-202ENST00000354880 PAPLNO95428 1278 aa16.02■□□□□ 0.16
CTSA-202ENST00000354880 VAV1P15498 845 aa16.02■□□□□ 0.16
CTSA-202ENST00000354880 RPL22P35268 128 aaKnown RBP16.02■□□□□ 0.16
CTSA-202ENST00000354880 AVPR1AP37288 418 aa16.02■□□□□ 0.16
CTSA-202ENST00000354880 PPIDQ08752 370 aaKnown RBP16.02■□□□□ 0.16
CTSA-202ENST00000354880 RABGAP1LQ5R372 815 aa16.02■□□□□ 0.16
CTSA-202ENST00000354880 CMTM8Q8IZV2 173 aa16.02■□□□□ 0.16
CTSA-202ENST00000354880 ART4Q93070 314 aa16.02■□□□□ 0.16
CTSA-202ENST00000354880 MYEOVQ96EZ4 313 aa16.02■□□□□ 0.16
CTSA-202ENST00000354880 NSUN3Q9H649 340 aaKnown RBP16.02■□□□□ 0.16
CTSA-202ENST00000354880 DZANK1Q9NVP4 752 aa16.02■□□□□ 0.16
CTSA-202ENST00000354880 ARHGAP26Q9UNA1 814 aa16.02■□□□□ 0.16
CTSA-202ENST00000354880 DFFAO00273 331 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 DNALI1O14645 258 aaPredicted RBP16.01■□□□□ 0.15
CTSA-202ENST00000354880 ITGA8P53708 1063 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 IZUMO3Q5VZ72 239 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 AFMIDQ63HM1 303 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 Q6ZNB5 142 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 CIR1Q86X95 450 aaPredicted RBP16.01■□□□□ 0.15
CTSA-202ENST00000354880 UMODL1-AS1Q8N2C9 162 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 TTC16Q8NEE8 873 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 P2RY11Q96G91 374 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 FMO2Q99518 471 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 SLC39A8Q9C0K1 460 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 ZNF576Q9H609 170 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 RETREG1Q9H6L5 497 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 PAK5Q9P286 719 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 CFAP97Q9P2B7 532 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 ZNF212Q9UDV6 495 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 ZMYM5Q9UJ78 669 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 SH3BP1Q9Y3L3 701 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 C5orf42Q9H799 3197 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 HELZP42694 1942 aaKnown RBP16.01■□□□□ 0.15
CTSA-202ENST00000354880 C5orf60A6NFR6 353 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 TP73O15350 636 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 GCATO75600 419 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 FAM153BP0C7A2 387 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 MAPKAPK2P49137 400 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 NDST2P52849 883 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 CAV1Q03135 178 aa16.01■□□□□ 0.15
CTSA-202ENST00000354880 ZNF33AQ06730 810 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms