RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 OR10T2Q8NGX3 314 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 FEZF2Q8TBJ5 459 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 GAB3Q8WWW8 586 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 PGM2Q96G03 612 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 HSFY1Q96LI6 401 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 PPM1HQ9ULR3 514 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 PRG3Q9Y2Y8 225 aaPredicted RBP10.38□□□□□ -0.75
SYNE1-203ENST00000354674 XPO1O14980 1071 aaKnown RBP10.38□□□□□ -0.75
SYNE1-203ENST00000354674 ATP9BO43861 1147 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 TADA2AO75478 443 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 ACRP10323 421 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 TAC1P20366 129 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 CD97P48960 835 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 BCAR1P56945 870 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 MTM1Q13496 603 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 DCTN2Q13561 401 aaKnown RBP10.38□□□□□ -0.75
SYNE1-203ENST00000354674 PARP6Q2NL67 630 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 CYP4A22Q5TCH4 519 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 TTC7BQ86TV6 843 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 CMTR2Q8IYT2 770 aaKnown RBP10.38□□□□□ -0.75
SYNE1-203ENST00000354674 THEM5Q8N1Q8 247 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 KCTD13Q8WZ19 329 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 PCED1BQ96HM7 432 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 CSNK1G1Q9HCP0 422 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 ATAD3AQ9NVI7 634 aa10.38□□□□□ -0.75
SYNE1-203ENST00000354674 TRNAU1APQ9NX07 287 aaKnown RBP10.38□□□□□ -0.75
SYNE1-203ENST00000354674 PTPRDP23468 1912 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 DDX3YO15523 660 aaKnown RBP10.37□□□□□ -0.75
SYNE1-203ENST00000354674 TBC1D4O60343 1298 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 ADORA2BP29275 332 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 MAN1A1P33908 653 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 SCNN1AP37088 669 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 RPL21P46778 160 aaKnown RBP10.37□□□□□ -0.75
SYNE1-203ENST00000354674 PHEXP78562 749 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 OCRLQ01968 901 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 YWHAHQ04917 246 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-203ENST00000354674 TMED2Q15363 201 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 WASHC2DQ5SRD0 308 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 PPP4R1Q8TF05 950 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 FNIP1Q8TF40 1166 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 BCL7CQ8WUZ0 217 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-203ENST00000354674 CKAP2Q8WWK9 683 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 BTBD6Q96KE9 485 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 ECSITQ9BQ95 431 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 DCUN1D5Q9BTE7 237 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 GPR62Q9BZJ7 368 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 CEP44Q9C0F1 390 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 ANAPC7Q9UJX3 599 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 AMFRQ9UKV5 643 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 TIMM22Q9Y584 194 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 E5RJQ4 531 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 H3BSA7 217 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 ADAM23O75077 832 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 NPR3P17342 541 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 SLC1A1P43005 524 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 GEMIN4P57678 1058 aaKnown RBP10.37□□□□□ -0.75
SYNE1-203ENST00000354674 RPL7AP62424 266 aaKnown RBP10.37□□□□□ -0.75
SYNE1-203ENST00000354674 ELAVL2Q12926 359 aaKnown RBP10.37□□□□□ -0.75
SYNE1-203ENST00000354674 CDC16Q13042 620 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 DNAJC24Q6P3W2 148 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 CLEC20AQ6ZU45 233 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 LRRTM3Q86VH5 581 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 ZDHHC17Q8IUH5 632 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 NIPA2Q8N8Q9 360 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 BADQ92934 168 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 CCDC124Q96CT7 223 aaKnown RBP10.37□□□□□ -0.75
SYNE1-203ENST00000354674 USP29Q9HBJ7 922 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 TMEM59LQ9UK28 342 aa10.37□□□□□ -0.75
SYNE1-203ENST00000354674 SF3B1O75533 1304 aaKnown RBP eCLIP10.37□□□□□ -0.75
SYNE1-203ENST00000354674 COL4A4P53420 1690 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-203ENST00000354674 CLDN5O00501 218 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 VILLO15195 856 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 RIPK2O43353 540 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 PROSCO94903 275 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 ZBTB11O95625 1053 aaPredicted RBP10.36□□□□□ -0.75
SYNE1-203ENST00000354674 TROVE2P10155 538 aaKnown RBP eCLIP10.36□□□□□ -0.75
SYNE1-203ENST00000354674 COMTP21964 271 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 CTNNA2P26232 953 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 MZF1P28698 734 aaPredicted RBP10.36□□□□□ -0.75
SYNE1-203ENST00000354674 ACADSBP45954 432 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 ENTPD1P49961 510 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 EMP3P54852 163 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 SNX16P57768 344 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 FPGSQ05932 587 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 ZNF252P-AS1Q0IIN9 211 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 GK3PQ14409 553 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 MESDQ14696 234 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 MAPRE1Q15691 268 aaKnown RBP10.36□□□□□ -0.75
SYNE1-203ENST00000354674 METTL21CQ5VZV1 264 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 FUT10Q6P4F1 479 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 ARCQ7LC44 396 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 FAM35AQ86V20 835 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 TMEM173Q86WV6 379 aaPredicted RBP10.36□□□□□ -0.75
SYNE1-203ENST00000354674 GCNAQ96QF7 691 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 TMEM209Q96SK2 561 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 ERP44Q9BS26 406 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 TMLHEQ9NVH6 421 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 PATJQ8NI35 1801 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 CARNS1A5YM72 827 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 MIF4GDA9UHW6 222 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms