RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 FBXO16Q8IX29 292 aaPredicted RBP9.85□□□□□ -0.83
RPE-201ENST00000354506 TTC16Q8NEE8 873 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 B4GALNT2Q8NHY0 566 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 MCMBPQ9BTE3 642 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 PDGFCQ9NRA1 345 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 GGA3Q9NZ52 723 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 RBPJLQ9UBG7 517 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 DCDC2Q9UHG0 476 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 ANGPTL2Q9UKU9 493 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 SOX13Q9UN79 622 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 DERAQ9Y315 318 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 MCM3APO60318 1980 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 ANKRD12Q6UB98 2062 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 CALRP27797 417 aaKnown RBP9.85□□□□□ -0.83
RPE-201ENST00000354506 FDFT1P37268 417 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 GRM5P41594 1212 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 GLRBP48167 497 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 IDH3AP50213 366 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 ROR2Q01974 943 aaKnown RBP9.85□□□□□ -0.83
RPE-201ENST00000354506 TMEM62Q0P6H9 643 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 NAB1Q13506 487 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 HIC1Q14526 733 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 LIMS2Q7Z4I7 341 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 ACOT1Q86TX2 421 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 GALNT15Q8N3T1 639 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 CCDC185Q8N715 623 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 ZSCAN18Q8TBC5 510 aaPredicted RBP9.85□□□□□ -0.83
RPE-201ENST00000354506 GDPD5Q8WTR4 605 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 HTR3CQ8WXA8 447 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 ZMAT2Q96NC0 199 aaKnown RBP9.85□□□□□ -0.83
RPE-201ENST00000354506 XPNPEP3Q9NQH7 507 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 UBP1Q9NZI7 540 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 BPTFQ12830 3046 aa9.85□□□□□ -0.83
RPE-201ENST00000354506 PDCD11Q14690 1871 aaKnown RBP9.84□□□□□ -0.83
RPE-201ENST00000354506 A0A0A0MRY4 1105 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 TPP1O14773 563 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 PPEF2O14830 753 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 FKBP6O75344 327 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 FGFR3P22607 806 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 RPL10P27635 214 aaKnown RBP9.84□□□□□ -0.83
RPE-201ENST00000354506 CSRP3P50461 194 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 SCNN1BP51168 640 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 AP2B1P63010 937 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 ARHGAP1Q07960 439 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 MMEL1Q495T6 779 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 CCNYQ8ND76 341 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 ZFAND2BQ8WV99 257 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 NT5C3BQ969T7 300 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 CNBD2Q96M20 576 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 SPATA13Q96N96 652 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 TRAPPC9Q96Q05 1148 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 GORASP1Q9BQQ3 440 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 PLEKHA5Q9HAU0 1116 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 S100A14Q9HCY8 104 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 GPRC5DQ9NZD1 345 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 GJD2Q9UKL4 321 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 FZD10Q9ULW2 581 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 SIN3BO75182 1162 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 GLRA3O75311 464 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 KLHL2O95198 593 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 PDGFRBP09619 1106 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 GLUD2P49448 558 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 RPS6KA3P51812 740 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 MARCH8Q5T0T0 291 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 TMEM198Q66K66 360 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 NXNQ6DKJ4 435 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 FRMD7Q6ZUT3 714 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 KDELC2Q7Z4H8 507 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 UNC93AQ86WB7 457 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 EGFL6Q8IUX8 553 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 SLC7A14Q8TBB6 771 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 ACTRT2Q8TDY3 377 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 SNRNP27Q8WVK2 155 aaKnown RBP9.84□□□□□ -0.83
RPE-201ENST00000354506 TFB1MQ8WVM0 346 aaKnown RBP9.84□□□□□ -0.83
RPE-201ENST00000354506 PRDM16Q9HAZ2 1276 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 RCOR3Q9P2K3 495 aaPredicted RBP9.84□□□□□ -0.83
RPE-201ENST00000354506 AP4E1Q9UPM8 1137 aa9.84□□□□□ -0.83
RPE-201ENST00000354506 ZNF638Q14966 1978 aaKnown RBP9.84□□□□□ -0.83
RPE-201ENST00000354506 KCNK1O00180 336 aa9.83□□□□□ -0.84
RPE-201ENST00000354506 ITGA2BP08514 1039 aa9.83□□□□□ -0.84
RPE-201ENST00000354506 TXNP10599 105 aaKnown RBP9.83□□□□□ -0.84
RPE-201ENST00000354506 MYL4P12829 197 aa9.83□□□□□ -0.84
RPE-201ENST00000354506 HOXA11P31270 313 aaPredicted RBP9.83□□□□□ -0.84
RPE-201ENST00000354506 MRPS22P82650 360 aaKnown RBP9.83□□□□□ -0.84
RPE-201ENST00000354506 CCNIQ14094 377 aa9.83□□□□□ -0.84
RPE-201ENST00000354506 FRG1Q14331 258 aaKnown RBP9.83□□□□□ -0.84
RPE-201ENST00000354506 ZRSR2Q15696 482 aaKnown RBP9.83□□□□□ -0.84
RPE-201ENST00000354506 OTUD1Q5VV17 481 aaPredicted RBP9.83□□□□□ -0.84
RPE-201ENST00000354506 MTHFD1LQ6UB35 978 aa9.83□□□□□ -0.84
RPE-201ENST00000354506 STRADAQ7RTN6 431 aa9.83□□□□□ -0.84
RPE-201ENST00000354506 CTU1Q7Z7A3 348 aaKnown RBP9.83□□□□□ -0.84
RPE-201ENST00000354506 WDR75Q8IWA0 830 aaKnown RBP9.83□□□□□ -0.84
RPE-201ENST00000354506 CRYBG2Q8N1P7 616 aa9.83□□□□□ -0.84
RPE-201ENST00000354506 SGF29Q96ES7 293 aa9.83□□□□□ -0.84
RPE-201ENST00000354506 DPEP3Q9H4B8 488 aa9.83□□□□□ -0.84
RPE-201ENST00000354506 LIN28AQ9H9Z2 209 aaKnown RBP9.83□□□□□ -0.84
RPE-201ENST00000354506 COPG2Q9UBF2 871 aa9.83□□□□□ -0.84
RPE-201ENST00000354506 UNCXA6NJT0 531 aa9.83□□□□□ -0.84
RPE-201ENST00000354506 SF3B1O75533 1304 aaKnown RBP eCLIP9.83□□□□□ -0.84
RPE-201ENST00000354506 VTNP04004 478 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms