RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 EFCAB8A8MWE9 144 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 LSM8O95777 96 aaKnown RBP10.12□□□□□ -0.79
MRPL55-204ENST00000348259 IGLV3-19P01714 112 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 CYP1A2P05177 515 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 KRT19P08727 400 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 PDGFRBP09619 1106 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 CISD3P0C7P0 127 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 MYBL1P10243 752 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 MBL2P11226 248 aaPredicted RBP10.12□□□□□ -0.79
MRPL55-204ENST00000348259 PTPN1P18031 435 aaKnown RBP10.12□□□□□ -0.79
MRPL55-204ENST00000348259 RDXP35241 583 aaKnown RBP10.12□□□□□ -0.79
MRPL55-204ENST00000348259 ATXN3P54252 364 aaPredicted RBP10.12□□□□□ -0.79
MRPL55-204ENST00000348259 CENPCQ03188 943 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 MYO1EQ12965 1108 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 MEI1Q5TIA1 1274 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 TMEM270Q6UE05 265 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 NAT16Q8N8M0 369 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 TPCN2Q8NHX9 752 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 SLC35G2Q8TBE7 412 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 ADAM32Q8TC27 787 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 SLITRK1Q96PX8 696 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 ZDHHC5Q9C0B5 715 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 ELOVL4Q9GZR5 314 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 SLC6A17Q9H1V8 727 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 DPEP3Q9H4B8 488 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.12□□□□□ -0.791e-6■■■■■ 103.7
MRPL55-204ENST00000348259 WSB2Q9NYS7 404 aaPredicted RBP10.12□□□□□ -0.79
MRPL55-204ENST00000348259 USP36Q9P275 1121 aaKnown RBP10.12□□□□□ -0.79
MRPL55-204ENST00000348259 DEC1Q9P2X7 70 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 UVRAGQ9P2Y5 699 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 SUSD2Q9UGT4 822 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 PCDHGC3Q9UN70 934 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 CYP8B1Q9UNU6 501 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 RAXQ9Y2V3 346 aa10.12□□□□□ -0.79
MRPL55-204ENST00000348259 GRID2IPA4D2P6 1211 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 GFRA2O00451 464 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 PALMO75781 387 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 ATP1A1P05023 1023 aaKnown RBP10.11□□□□□ -0.79
MRPL55-204ENST00000348259 YWHAQP27348 245 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 GNA15P30679 374 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 CDH5P33151 784 aaPredicted RBP10.11□□□□□ -0.79
MRPL55-204ENST00000348259 WASP42768 502 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 NAP1L1P55209 391 aaKnown RBP10.11□□□□□ -0.79
MRPL55-204ENST00000348259 INCA1Q0VD86 236 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 PLEKHG6Q3KR16 790 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 WDR72Q3MJ13 1102 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 HTR3DQ70Z44 454 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 ZNF572Q7Z3I7 529 aaPredicted RBP10.11□□□□□ -0.79
MRPL55-204ENST00000348259 PHF13Q86YI8 300 aaPredicted RBP10.11□□□□□ -0.79
MRPL55-204ENST00000348259 NUP93Q8N1F7 819 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 PGBD3Q8N328 593 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 MNS1Q8NEH6 495 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 PDZD8Q8NEN9 1154 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 ZMIZ2Q8NF64 920 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 SCAMP5Q8TAC9 235 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 ZNF606Q8WXB4 792 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 KCNK16Q96T55 309 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 TLR10Q9BXR5 811 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 THAP2Q9H0W7 228 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 LHX5Q9H2C1 402 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 CCSER2Q9H7U1 834 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 IL21RQ9HBE5 538 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 SEPT11Q9NVA2 429 aaKnown RBP10.11□□□□□ -0.79
MRPL55-204ENST00000348259 TAS2R14Q9NYV8 317 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 HYOU1Q9Y4L1 999 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 PCDHGB2Q9Y5G2 931 aa10.11□□□□□ -0.79
MRPL55-204ENST00000348259 A0A1B0GTW7 788 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 CLDN5O00501 218 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 MED7O43513 233 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 BUB1O43683 1085 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 CILPO75339 1184 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 C1QL1O75973 258 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 CLSTN1O94985 981 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 RTN3O95197 1032 aaPredicted RBP10.1□□□□□ -0.79
MRPL55-204ENST00000348259 MAOBP27338 520 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 GNL1P36915 607 aaPredicted RBP10.1□□□□□ -0.79
MRPL55-204ENST00000348259 NOP2P46087 812 aaKnown RBP10.1□□□□□ -0.79
MRPL55-204ENST00000348259 C1QBPQ07021 282 aaKnown RBP10.1□□□□□ -0.79
MRPL55-204ENST00000348259 CKAP4Q07065 602 aaKnown RBP10.1□□□□□ -0.79
MRPL55-204ENST00000348259 PTPRNQ16849 979 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 PREPLQ4J6C6 727 aaPredicted RBP10.1□□□□□ -0.79
MRPL55-204ENST00000348259 HECTD3Q5T447 861 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 TAF3Q5VWG9 929 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 C11orf63Q6NUN7 778 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 Q6ZNB5 142 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 RSRC2Q7L4I2 434 aaKnown RBP10.1□□□□□ -0.79
MRPL55-204ENST00000348259 SCUBE3Q8IX30 993 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 MCOLN2Q8IZK6 566 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 B3GALNT2Q8NCR0 500 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 HNRNPLLQ8WVV9 542 aaKnown RBP10.1□□□□□ -0.79
MRPL55-204ENST00000348259 FOXJ1Q92949 421 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 FBXO32Q969P5 355 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 ELMO3Q96BJ8 720 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 CRELD1Q96HD1 420 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 CARD6Q9BX69 1037 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 KLF16Q9BXK1 252 aaPredicted RBP10.1□□□□□ -0.79
MRPL55-204ENST00000348259 MKRN2Q9H000 416 aaKnown RBP10.1□□□□□ -0.79
MRPL55-204ENST00000348259 ACP6Q9NPH0 428 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 LCMT1Q9UIC8 334 aa10.1□□□□□ -0.79
MRPL55-204ENST00000348259 APOBEC2Q9Y235 224 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms