RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 ATP6V1B1P15313 513 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 NNMTP40261 264 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 GPD2P43304 727 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 RAD51Q06609 339 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 CTBP1Q13363 440 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 SNX30Q5VWJ9 437 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 C16orf89Q6UX73 402 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 SZRD1Q7Z422 152 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 FNIP1Q8TF40 1166 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 DDX1Q92499 740 aaKnown RBP13.35□□□□□ -0.27
TCF3-202ENST00000344749 GPBP1L1Q9HC44 474 aaPredicted RBP13.35□□□□□ -0.27
TCF3-202ENST00000344749 C2CD4BA6NLJ0 364 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 HACD1B0YJ81 288 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 MSI1O43347 362 aaKnown RBP13.35□□□□□ -0.27
TCF3-202ENST00000344749 APOA4P06727 396 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 NCALDP61601 193 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 MRPS6P82932 125 aaKnown RBP13.35□□□□□ -0.27
TCF3-202ENST00000344749 PTP4A2Q12974 167 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 ALYREFQ86V81 257 aaKnown RBP13.35□□□□□ -0.27
TCF3-202ENST00000344749 ECHDC2Q86YB7 292 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 ELMOD1Q8N336 334 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 MAML3Q96JK9 1138 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 DUSP16Q9BY84 665 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 SNX10Q9Y5X0 201 aa13.35□□□□□ -0.27
TCF3-202ENST00000344749 CCDC88AQ3V6T2 1871 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 LAMA4Q16363 1823 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 TCRBV7S3A2A0A539 114 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 SRRM3A6NNA2 597 aaPredicted RBP13.34□□□□□ -0.27
TCF3-202ENST00000344749 F8W8V4 182 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 PMM2O15305 246 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 PQBP1O60828 265 aaKnown RBP13.34□□□□□ -0.27
TCF3-202ENST00000344749 PIGNO95427 931 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 DDR2Q16832 855 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 CERCAMQ5T4B2 595 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 PCDH19Q8TAB3 1148 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 UBXN6Q9BZV1 441 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 TRIM15Q9C019 465 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 CDHR5Q9HBB8 845 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 SLC27A5Q9Y2P5 690 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 PCDHB5Q9Y5E4 795 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 NT5C1B-RDH14C9J2C7 533 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 RANBP1P43487 201 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 RENBPP51606 427 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 SLC25A3Q00325 362 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 FUT11Q495W5 492 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 AGKQ53H12 422 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 TMPRSS6Q8IU80 811 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 PIWIL2Q8TC59 973 aaKnown RBP13.34□□□□□ -0.27
TCF3-202ENST00000344749 SNX19Q92543 992 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 MARK4Q96L34 752 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 TRHDEQ9UKU6 1024 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 MYH1P12882 1939 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 DDHD2O94830 711 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 ITGB6P18564 788 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 TSPAN8P19075 237 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 ADRA1BP35368 520 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 CRYBB1P53674 252 aaPredicted RBP13.34□□□□□ -0.27
TCF3-202ENST00000344749 TMEM63BQ5T3F8 832 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 GRTP1Q5TC63 336 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 NAIF1Q69YI7 327 aaPredicted RBP13.34□□□□□ -0.27
TCF3-202ENST00000344749 CARNMT1Q8N4J0 409 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 PCYT2Q99447 389 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 NDNQ99608 321 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 CPNE1Q99829 537 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 CCDC90BQ9GZT6 254 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 LSM7Q9UK45 103 aaKnown RBP13.34□□□□□ -0.27
TCF3-202ENST00000344749 ORC6Q9Y5N6 252 aa13.34□□□□□ -0.27
TCF3-202ENST00000344749 TBKBP1A7MCY6 615 aa13.33□□□□□ -0.27
TCF3-202ENST00000344749 ITGA2BP08514 1039 aa13.33□□□□□ -0.27
TCF3-202ENST00000344749 THRAP10827 490 aa13.33□□□□□ -0.27
TCF3-202ENST00000344749 OXCT1P55809 520 aa13.33□□□□□ -0.27
TCF3-202ENST00000344749 TBL3Q12788 808 aaKnown RBP13.33□□□□□ -0.27
TCF3-202ENST00000344749 SPANXN3Q5MJ09 141 aa13.33□□□□□ -0.27
TCF3-202ENST00000344749 THEMIS2Q5TEJ8 643 aa13.33□□□□□ -0.27
TCF3-202ENST00000344749 TRMT10BQ6PF06 316 aaKnown RBP13.33□□□□□ -0.27
TCF3-202ENST00000344749 IZUMO2Q6UXV1 221 aa13.33□□□□□ -0.27
TCF3-202ENST00000344749 RNF168Q8IYW5 571 aaPredicted RBP13.33□□□□□ -0.27
TCF3-202ENST00000344749 ARHGAP18Q8N392 663 aa13.33□□□□□ -0.27
TCF3-202ENST00000344749 ZC3H15Q8WU90 426 aaKnown RBP13.33□□□□□ -0.27
TCF3-202ENST00000344749 PIDD1Q9HB75 910 aa13.33□□□□□ -0.27
TCF3-202ENST00000344749 MRPL40Q9NQ50 206 aaKnown RBP13.33□□□□□ -0.27
TCF3-202ENST00000344749 CASS4Q9NQ75 786 aa13.33□□□□□ -0.27
TCF3-202ENST00000344749 WARS2Q9UGM6 360 aaKnown RBP13.33□□□□□ -0.27
TCF3-202ENST00000344749 VPS28Q9UK41 221 aa13.33□□□□□ -0.27
TCF3-202ENST00000344749 SOX13Q9UN79 622 aa13.33□□□□□ -0.27
TCF3-202ENST00000344749 MBL2P11226 248 aaPredicted RBP13.33□□□□□ -0.28
TCF3-202ENST00000344749 IL10P22301 178 aa13.33□□□□□ -0.28
TCF3-202ENST00000344749 YWHAQP27348 245 aa13.33□□□□□ -0.28
TCF3-202ENST00000344749 LILRA4P59901 499 aa13.33□□□□□ -0.28
TCF3-202ENST00000344749 SLC25A52Q3SY17 297 aa13.33□□□□□ -0.28
TCF3-202ENST00000344749 RAP1GAP2Q684P5 730 aa13.33□□□□□ -0.28
TCF3-202ENST00000344749 NEPROQ6NW34 567 aa13.33□□□□□ -0.28
TCF3-202ENST00000344749 TMEM86AQ8N2M4 240 aa13.33□□□□□ -0.28
TCF3-202ENST00000344749 TTC30BQ8N4P2 665 aa13.33□□□□□ -0.28
TCF3-202ENST00000344749 PCYOX1LQ8NBM8 494 aa13.33□□□□□ -0.28
TCF3-202ENST00000344749 KCTD15Q96SI1 283 aaPredicted RBP13.33□□□□□ -0.28
TCF3-202ENST00000344749 PIF1Q9H611 641 aa13.33□□□□□ -0.28
TCF3-202ENST00000344749 EFCAB1Q9HAE3 211 aa13.33□□□□□ -0.28
TCF3-202ENST00000344749 RNF112Q9ULX5 631 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms