RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SYTL3Q4VX76 610 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 LRRC57Q8N9N7 239 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 SPIRE2Q8WWL2 714 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 SEMA4DQ92854 862 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 CRAMP1Q96RY5 1269 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 MMP19Q99542 508 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 GNEQ9Y223 722 aaKnown RBP18.42■□□□□ 0.54
SMC4-201ENST00000344722 BANF1O75531 89 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 PPP3CCP48454 512 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 FMO1Q01740 532 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 PPP3CAQ08209 521 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 SLC1A5Q15758 541 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 IL31Q6EBC2 164 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 ARL10Q8N8L6 244 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 GMCL1Q96IK5 515 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 PRKD2Q9BZL6 878 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 EHD3Q9NZN3 535 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 CDH9Q9ULB4 789 aa18.42■□□□□ 0.54
SMC4-201ENST00000344722 EFCAB10A6NFE3 127 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 F8W810 466 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 SNPHO15079 494 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 SPIRE1Q08AE8 756 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 DGCR6Q14129 220 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 SPRTNQ9H040 489 aaPredicted RBP18.41■□□□□ 0.54
SMC4-201ENST00000344722 HDHD2Q9H0R4 259 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 LRRC4CQ9HCJ2 640 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 ASB14A6NK59 587 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 C2orf81A6NN90 581 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 JCHAINP01591 159 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 COX10Q12887 443 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 COL9A3Q14050 684 aaPredicted RBP18.41■□□□□ 0.54
SMC4-201ENST00000344722 NR6A1Q15406 480 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 ANGEL2Q5VTE6 544 aaKnown RBP18.41■□□□□ 0.54
SMC4-201ENST00000344722 ZDHHC17Q8IUH5 632 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 GMCL1P1Q8NEA9 526 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 BLOC1S5Q8TDH9 187 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 TBC1D13Q9NVG8 400 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 TRHDEQ9UKU6 1024 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 CHKBQ9Y259 395 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 TXNP10599 105 aaKnown RBP18.41■□□□□ 0.54
SMC4-201ENST00000344722 RAB27AP51159 221 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 MTMR2Q13614 643 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 TSNQ15631 228 aaKnown RBP18.41■□□□□ 0.54
SMC4-201ENST00000344722 PGS1Q32NB8 556 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 ATG14Q6ZNE5 492 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 ACOT1Q86TX2 421 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 SATL1Q86VE3 508 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 SIX5Q8N196 739 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 SAMD3Q8N6K7 520 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 FAM47BQ8NA70 645 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 BPGMP07738 259 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 ANXA6P08133 673 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 IL12AP29459 219 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 MAGEA10P43363 369 aaPredicted RBP18.41■□□□□ 0.54
SMC4-201ENST00000344722 TTLL9Q3SXZ7 439 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 OTOP1Q7RTM1 612 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 FAM131BQ86XD5 332 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 FAM126BQ8IXS8 530 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 LRRC71Q8N4P6 559 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 RDH11Q8TC12 318 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 SPATA17Q96L03 361 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 DHX33Q9H6R0 707 aaKnown RBP18.41■□□□□ 0.54
SMC4-201ENST00000344722 PRDM16Q9HAZ2 1276 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 LNPEPQ9UIQ6 1025 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 SPATA2Q9UM82 520 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 PIK3C2BO00750 1634 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 GLP2RO95838 553 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 POU1F1P28069 291 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 PCSK1P29120 753 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 EFCAB12Q6NXP0 572 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 PACS1Q6VY07 963 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 KBTBD8Q8NFY9 601 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 UTP15Q8TED0 518 aaKnown RBP18.41■□□□□ 0.54
SMC4-201ENST00000344722 ZFAND2BQ8WV99 257 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 DPY30Q9C005 99 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 UNKQ9C0B0 810 aaKnown RBP18.41■□□□□ 0.54
SMC4-201ENST00000344722 CDH19Q9H159 772 aa18.41■□□□□ 0.54
SMC4-201ENST00000344722 CD163L1Q9NR16 1453 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 TSPAN9O75954 239 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 FAM86B2P0C5J1 330 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 AADATQ8N5Z0 425 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 RERGLQ9H628 205 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 SALL4Q9UJQ4 1053 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 FAM95CA0A1B0GW59 222 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 ETFBP38117 255 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 TAF6P49848 677 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 BNC1Q01954 994 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 MFSD4BQ5TF39 518 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 AMIGO2Q86SJ2 522 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 C17orf50Q8WW18 174 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 KAT5Q92993 513 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 TRIM39Q9HCM9 518 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 POLE3Q9NRF9 147 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 VPS45Q9NRW7 570 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 PLA2G4CQ9UP65 541 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 NFIXQ14938 502 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 FNDC5Q8NAU1 212 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 BPIFB6Q8NFQ5 453 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 USP20Q9Y2K6 914 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 CASZ1Q86V15 1759 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms