RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 GIPC2Q8TF65 315 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 GPRASP2Q96D09 838 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 PDCD2LQ9BRP1 358 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 FAM96AQ9H5X1 160 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 ITM2CQ9NQX7 267 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 HOXC10Q9NYD6 342 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 COL20A1Q9P218 1284 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 LIMD1Q9UGP4 676 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 ZNHIT2Q9UHR6 403 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 MFHAS1Q9Y4C4 1052 aa7.96□□□□□ -1.13
KPNA1-201ENST00000344337 C15orf38-AP3S2A0A0A6YYH1 394 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 H0Y626 953 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 PSMD11O00231 422 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 TRIM16O95361 564 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 KRT8P05787 483 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 NUDT17P0C025 328 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 XPAP23025 273 aaPredicted RBP7.96□□□□□ -1.14
KPNA1-201ENST00000344337 HNRNPH3P31942 346 aaKnown RBP7.96□□□□□ -1.14
KPNA1-201ENST00000344337 PRKCIP41743 596 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 SLC16A1P53985 500 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 CWF19L1Q69YN2 538 aaKnown RBP7.96□□□□□ -1.14
KPNA1-201ENST00000344337 ARPINQ7Z6K5 226 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 DEFB106AQ8N104 65 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 ZNF781Q8N8C0 355 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.96□□□□□ -1.14
KPNA1-201ENST00000344337 FAM81AQ8TBF8 368 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 NR1H4Q96RI1 486 aaPredicted RBP7.96□□□□□ -1.14
KPNA1-201ENST00000344337 ZBTB18Q99592 522 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 ZDHHC18Q9NUE0 388 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 SYBUQ9NX95 663 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 ZNF212Q9UDV6 495 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 TM9SF1O15321 606 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 RAB6CQ53S08 254 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 STRIP1Q5VSL9 837 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 NAPRTQ6XQN6 538 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 TSPAN14Q8NG11 270 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 HPS1Q92902 700 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 SLC10A4Q96EP9 437 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 LENG8Q96PV6 779 aaPredicted RBP7.96□□□□□ -1.14
KPNA1-201ENST00000344337 RIT2Q99578 217 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 SNRNP25Q9BV90 132 aaKnown RBP7.96□□□□□ -1.14
KPNA1-201ENST00000344337 TRIM15Q9C019 465 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 RAB6CQ9H0N0 254 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 RMI1Q9H9A7 625 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 SIX2Q9NPC8 291 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.96□□□□□ -1.14
KPNA1-201ENST00000344337 RNF112Q9ULX5 631 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 GNEQ9Y223 722 aaKnown RBP7.96□□□□□ -1.14
KPNA1-201ENST00000344337 PSMD10O75832 226 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 WDR47O94967 919 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 COX4I1P13073 169 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 NEK2P51955 445 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 IRF9Q00978 393 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 MGAT5BQ3V5L5 792 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 Q4G0T1 1027 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 SLC45A4Q5BKX6 768 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 ANKRD23Q86SG2 305 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 SPPL2CQ8IUH8 684 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 TMEM192Q8IY95 271 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 KIAA0319LQ8IZA0 1049 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 OR6J1Q8NGC5 347 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 PNPT1Q8TCS8 783 aaKnown RBP7.96□□□□□ -1.14
KPNA1-201ENST00000344337 MFSD3Q96ES6 412 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 NMRAL1Q9HBL8 299 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 NWD1Q149M9 1564 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 SIGLEC1Q9BZZ2 1709 aa7.96□□□□□ -1.14
KPNA1-201ENST00000344337 MST1RQ04912 1400 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 OGTO15294 1046 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 AHCYL1O43865 530 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 LRATO95237 230 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 HSD17B4P51659 736 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 ASTE1Q2TB18 679 aaPredicted RBP7.95□□□□□ -1.14
KPNA1-201ENST00000344337 EEF1DP3Q658K8 133 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 DHDDSQ86SQ9 333 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 MFN1Q8IWA4 741 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 B3GALNT2Q8NCR0 500 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 TLCD1Q96CP7 247 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 RMND5BQ96G75 393 aaPredicted RBP7.95□□□□□ -1.14
KPNA1-201ENST00000344337 EPAS1Q99814 870 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 AP5M1Q9H0R1 490 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 MMADHCQ9H3L0 296 aaPredicted RBP7.95□□□□□ -1.14
KPNA1-201ENST00000344337 ZC4H2Q9NQZ6 224 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 RBM22Q9NW64 420 aaKnown RBP eCLIP7.95□□□□□ -1.141e-6■■■■■ 34.8
KPNA1-201ENST00000344337 SLC24A2Q9UI40 661 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 TIMM22Q9Y584 194 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 PRPF4O43172 522 aaKnown RBP eCLIP7.95□□□□□ -1.14
KPNA1-201ENST00000344337 METTL18O95568 372 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 BCL10O95999 233 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 ERBB2P04626 1255 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 ICAM1P05362 532 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 PSMA4P25789 261 aaKnown RBP7.95□□□□□ -1.14
KPNA1-201ENST00000344337 SERPINB1P30740 379 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 SOAT1P35610 550 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 KCNK10P57789 538 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 BLMHQ13867 455 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 TMEM161BQ8NDZ6 487 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 PSMA8Q8TAA3 256 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 CPT1BQ92523 772 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 ASIC4Q96FT7 647 aa7.95□□□□□ -1.14
KPNA1-201ENST00000344337 HERPUD2Q9BSE4 406 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms