RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 RSAD2Q8WXG1 361 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 TRIB2Q92519 343 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 ACDQ96AP0 544 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 LRRC39Q96DD0 335 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 ASB9Q96DX5 294 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 ZNF486Q96H40 463 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-201ENST00000343524 ZIC5Q96T25 663 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 UHRF1Q96T88 793 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-201ENST00000343524 OR2B2Q9GZK3 357 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 TRPV6Q9H1D0 765 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 RAD21L1Q9H4I0 556 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 MARCH7Q9H992 704 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 TUFT1Q9NNX1 390 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 PARVAQ9NVD7 372 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 WDR70Q9NW82 654 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 SERPINB13Q9UIV8 391 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 SNED1Q8TER0 1413 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 RGSL1A5PLK6 1076 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 KBTBD13C9JR72 458 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 GOLGA8SH3BPF8 625 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 J3QRK9 145 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 CLOCKO15516 846 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 MSI1O43347 362 aaKnown RBP8.31□□□□□ -1.08
ATG4A-201ENST00000343524 ASNA1O43681 348 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 TADA2AO75478 443 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 MYO1DO94832 1006 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 CPNE6O95741 557 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 CRYZL1O95825 349 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 ZSCAN5DPP0CG00 497 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 UNGP13051 313 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-201ENST00000343524 M6PRP20645 277 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 THOP1P52888 689 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 TPTEP56180 551 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 GSTO1P78417 241 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 MRPS5P82675 430 aaKnown RBP8.31□□□□□ -1.08
ATG4A-201ENST00000343524 SF3B4Q15427 424 aaKnown RBP eCLIP8.31□□□□□ -1.082e-6■■■■■ 28.8
ATG4A-201ENST00000343524 FASTKD1Q53R41 847 aaKnown RBP8.31□□□□□ -1.08
ATG4A-201ENST00000343524 FGD3Q5JSP0 725 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 SLC10A5Q5PT55 438 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 FNBP1LQ5T0N5 605 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 MBLAC2Q68D91 279 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 PLEKHG7Q6ZR37 379 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 NUDT18Q6ZVK8 323 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 SYNE4Q8N205 404 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 ANKFN1Q8N957 763 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 SLC35B2Q8TB61 432 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 SHKBP1Q8TBC3 707 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 FBXL8Q96CD0 374 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 RMDN1Q96DB5 314 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 ZNF512Q96ME7 567 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-201ENST00000343524 UIMC1Q96RL1 719 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 BCL7BQ9BQE9 202 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 SENP7Q9BQF6 1050 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 SP140LQ9H930 580 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 VAT1LQ9HCJ6 419 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 DIABLOQ9NR28 239 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 GDAP2Q9NXN4 497 aa8.31□□□□□ -1.08
ATG4A-201ENST00000343524 RBMX2Q9Y388 322 aaKnown RBP8.31□□□□□ -1.08
ATG4A-201ENST00000343524 hCG_1818297A0A087WSY0 165 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 NOP56O00567 594 aaKnown RBP8.3□□□□□ -1.08
ATG4A-201ENST00000343524 LCE2BO14633 110 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 TEX28O15482 410 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 DCXO43602 365 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 ZC3H11AO75152 810 aaKnown RBP eCLIP8.3□□□□□ -1.08
ATG4A-201ENST00000343524 DNAJB5O75953 348 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 SORBS2O94875 1100 aaKnown RBP8.3□□□□□ -1.08
ATG4A-201ENST00000343524 SLITRK3O94933 977 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 USP17L8P0C7I0 530 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 MAPTP10636 758 aaKnown RBP8.3□□□□□ -1.08
ATG4A-201ENST00000343524 PRKCHP24723 683 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 EPHA3P29320 983 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 HPCAL1P37235 193 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 SERPINB10P48595 397 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 NUMBP49757 651 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 GNG2P59768 71 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 MRPS9P82933 396 aaKnown RBP8.3□□□□□ -1.08
ATG4A-201ENST00000343524 OTUD4Q01804 1114 aaKnown RBP8.3□□□□□ -1.08
ATG4A-201ENST00000343524 TAP1Q03518 808 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 SPIRE1Q08AE8 756 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 CDC20Q12834 499 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 TRAP1Q12931 704 aaKnown RBP8.3□□□□□ -1.08
ATG4A-201ENST00000343524 NRF1Q16656 503 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 AOC3Q16853 763 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 PUS10Q3MIT2 529 aaKnown RBP8.3□□□□□ -1.08
ATG4A-201ENST00000343524 PPM1LQ5SGD2 360 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 INTS11Q5TA45 600 aaKnown RBP8.3□□□□□ -1.08
ATG4A-201ENST00000343524 RINT1Q6NUQ1 792 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 FAM117BQ6P1L5 589 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 USP17L2Q6R6M4 530 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 ABRAXAS1Q6UWZ7 409 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 TIFABQ6ZNK6 161 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 CDHR3Q6ZTQ4 885 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 TMEM26Q6ZUK4 368 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 GET4Q7L5D6 327 aaPredicted RBP8.3□□□□□ -1.08
ATG4A-201ENST00000343524 ZNF720Q7Z2F6 126 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 PODNQ7Z5L7 613 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 CAMK1DQ8IU85 385 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 CCDC60Q8IWA6 550 aaPredicted RBP8.3□□□□□ -1.08
ATG4A-201ENST00000343524 ANKRD13AQ8IZ07 590 aa8.3□□□□□ -1.08
ATG4A-201ENST00000343524 GLIS1Q8NBF1 620 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms